Gene Rpic12D_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1784 
Symbol 
ID8019440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1906220 
End bp1906933 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID644830568 
Productanaerobic ribonucleoside-triphosphate reductase activating protein 
Protein accessionYP_002981738 
Protein GI241663378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0286287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.825212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCG CTTCTTCGTT GAAGACCGCG CCCGCTGAGC CGCCACACTG CCCGCCGCCG 
GCCATCGGCG GCCTGGCACC TTTTTCCAGC GTCGACTGGC CCGGGCAGCT TGCGGCGGTG
GTGTTCGTGG CCGGCTGCCC GTGGCGCTGT CATTACTGCC ACAACCCGCA CTTGCAGACC
CGGACACGCA CGCTGGATTG GAACGACGTC TTCGCCTTTC TGCAGCGTCG CACGGGCCTG
CTCGATGCGG TGGTCTTCTC GGGCGGTGAA CCGCTGAGCG AGCCGCACCT GCCGCAACTG
ATACGCGACG TGCGGGCGCT CGGCTACAAG ATTGGCCTGC ACACCGGCGG TATCTATCCG
GCGCGCCTGA CCGACGTACT GCCGCAGGTG GACTGGGTGG GGCTCGACAT CAAGACCAGC
GCACCGCACT ACGACGCGCT CACGGGCCGC CGCGGCAGCG CAGCGCCGGT CGATGCGTGC
CTGGATCTTC TGCTGCAGAA CGGCGGCGCA TTCGAATGCC GCACCACATG GCACCCCGAC
TGGTTGCCGG AACCGCAACT TCTTGCGCTG GCGCAAAACC TCAGCCGGCG CGGCGTGAAA
CACTACGCAC TACAAGCCTA CCGAAGTGCC CCCGGAACCC CGGCCATCAC GCTGCCCAGC
GAGGGCACCC AGCGCGCATT GGCTGCCAGC TTTTCTTCTT TCTGTTGCCG GTGA
 
Protein sequence
MNAASSLKTA PAEPPHCPPP AIGGLAPFSS VDWPGQLAAV VFVAGCPWRC HYCHNPHLQT 
RTRTLDWNDV FAFLQRRTGL LDAVVFSGGE PLSEPHLPQL IRDVRALGYK IGLHTGGIYP
ARLTDVLPQV DWVGLDIKTS APHYDALTGR RGSAAPVDAC LDLLLQNGGA FECRTTWHPD
WLPEPQLLAL AQNLSRRGVK HYALQAYRSA PGTPAITLPS EGTQRALAAS FSSFCCR