| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1780 |
|---|
| Symbol | |
|---|
| ID | 8019436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1901906 |
|---|
| End bp | 1903174 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644830564 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_002981734 |
|---|
| Protein GI | 241663374 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.707685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACACCA AACGTCTGAC CTCCCACATT GGGCTGGCAA TGCTGCTGGG CATTGCCGTC
GGCTGGGGTT GCCACGAATA CGCCAAGGAC GCTGCGGCGG CCAAGGACAT CGCTTCGTAC
TTCAGCATCA TCACCGACAT CTTCCTGCGC ATGATCAAGA TGATCATTGC GCCGCTGGTG
TTCTCGACGC TGGTGACCGG CCTGGCGAGC ATGAGCGGCG GCCGTTCGGT CGGCCGCGTG
GGCCTGCGCG CCATGATCTG GTTTGTGTGT GCATCGGCTA CGTCGCTGGC GCTGGGCATG
CTGCTGGTCA ACTTCTTCCA GCCGGGCATG CACATGAACC TGGCGCTCCC GGACGTATCG
GCCACGTCGG GCCTGAAGAC AGGCGACTTC ACGCTCAAGG CGTTCATCAC GCACGTGTTC
CCGCGCAGCA TCGTGGAAGC CATGGCCACC AATGAGATCC TGCAGATCCT GGTGTTCTCG
CTGTTCTTTG GCGCCGCGCT GTCGACGATG AAGAACCCGA TGGAGAGCGT GATCGGCCGC
GGGCTAGAAG AGCTGACCAA GCTGATGTTC CGCATTACCG ACTATGTGAT GCGCTTCGCG
CCGCTGGGCG TATTTGCCGC CATGGCCGCT GCCATCACGG TGGAAGGCGT GGGCGTGCTC
GTGACCTACG GCAAGCTGAT CGGCGAGTTC TACCTGGGCC TGGCGCTGCT GTGGGCGATC
CTGTTCTTTG TCGGCTATGT GCTGCTTGGC CGCTCGCTGG GCCGTCTGCT GGGCCTGATT
CGTGAACCGA CCATGCTGGC GTTTGCCACG GCCAGCAGCG AATCGGCGTA CCCGAAGACG
ATGGAAGCGC TGGAAAAATT TGGTGTGCCC AAGCGCGTTG CCAGCTTCGT GCTGCCGTTG
GGGTATTCGT TCAACCTGGA TGGCTCGATG ATGTATCAGG CGTTTGCGGT GCTGTTCATT
GCGCAGGCGT ACAACATCGA AATGAGCTTC ACACAGCAGG TGACGCTGCT GCTGGTGCTG
ATGCTCACGA GCAAGGGCAT GGCGGGCGTT GCACGCGCTT CGCTGGTGGT GGTGGCGGCC
ACGCTGCCGA TGTTCCATCT GCCCGAAGCC GGTCTGCTGC TGATCATCGG GATCGACCAG
TTCTTCGACA TGGGCCGCAC GGCCACCAAC GTGATCGGCA ACAGCCTGGC CACGGCTGTG
GTGGCGAAGT ACGAGCCGGC CGATGAAGAA AGCGAGGCCG AAGTTGCCGC GCAGCCGAAC
CTCGGCTGA
|
|---|
| Protein sequence | MNTKRLTSHI GLAMLLGIAV GWGCHEYAKD AAAAKDIASY FSIITDIFLR MIKMIIAPLV
FSTLVTGLAS MSGGRSVGRV GLRAMIWFVC ASATSLALGM LLVNFFQPGM HMNLALPDVS
ATSGLKTGDF TLKAFITHVF PRSIVEAMAT NEILQILVFS LFFGAALSTM KNPMESVIGR
GLEELTKLMF RITDYVMRFA PLGVFAAMAA AITVEGVGVL VTYGKLIGEF YLGLALLWAI
LFFVGYVLLG RSLGRLLGLI REPTMLAFAT ASSESAYPKT MEALEKFGVP KRVASFVLPL
GYSFNLDGSM MYQAFAVLFI AQAYNIEMSF TQQVTLLLVL MLTSKGMAGV ARASLVVVAA
TLPMFHLPEA GLLLIIGIDQ FFDMGRTATN VIGNSLATAV VAKYEPADEE SEAEVAAQPN
LG
|
|---|
| |