Gene Rpic12D_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1777 
Symbol 
ID8019433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1898734 
End bp1899273 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID644830561 
Producthypothetical protein 
Protein accessionYP_002981731 
Protein GI241663371 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.794727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGC CCATCGCTCC GCTGCGCCCG ATTCCGCGCC TCATCTTCTT TTCCCGCTGG 
CTGCAACTGC CGCTTTACAT GGGGCTGATC ATTGCCCAGG CAGCGTATGT GTACCTTTTC
GTCGTCGAGG TGTGGCACCT GGTTTCGCAC CTGGGCGACA TGGACGAAAC CAAGATCATG
CTGGCCGTGC TGGGCCTGAT CGACGTGGTC ATGATCTCCA ACCTGCTGAT CATGGTGATC
ATCGGCGGGT ACGACATCTT TGTGTCCAAG CTCGGCATCG AAGGCCATGA AGATGAGCCC
GAATGGCTGG ACCACGTCAA TGCCGGTGTG CTGAAGGTGA AACTGTCGAT GGCGCTGATC
AGCATCTCGT CGATCCACCT GCTCAAGACG TTCATCGACG CTGCCCAGAA AGACACGCAC
ACGATCCTGT GGCAGGTAGC GATCCACGTG GCGTTCCTGG TGTCTGCGCT GGTGATGGCG
TGGGTGGACC GCATCGTTTC GCACGCGCAT CCGCACGGCG AGGCTGCCGA CGCACATTGA
 
Protein sequence
MKSPIAPLRP IPRLIFFSRW LQLPLYMGLI IAQAAYVYLF VVEVWHLVSH LGDMDETKIM 
LAVLGLIDVV MISNLLIMVI IGGYDIFVSK LGIEGHEDEP EWLDHVNAGV LKVKLSMALI
SISSIHLLKT FIDAAQKDTH TILWQVAIHV AFLVSALVMA WVDRIVSHAH PHGEAADAH