Gene Rpic12D_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1776 
Symbol 
ID8019432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1897719 
End bp1898645 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID644830560 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002981730 
Protein GI241663370 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGG TCGGCAGCAA CGTCGGTTTC GGTAAATCGA TCGTCGCCGT CATGCCGGTG 
ATGCTGTTTG CGTTGCTGCG TTTTCTGATT GCCATCGTGT GCATGGCGCC GTGGTACAAG
CCCGCGCGCA TGCGCCGCGT GACGGGCGGC GAGTGGACCA ACCTGTTCCT CCAGGCCTTT
TTCGGTACGT TCGGTTTTAC GTTGCTGATG CTGAACGGCG TGCGGCTGAC CTCGGCGCTG
GCTGCGGGCA TCATCACCAG TACGATTCCA GCCGCGGTGG CGCTGCTGTC ATGGCTGGTG
CTGCGCGAAA AACCCTCGGG GCGGACGCTG GCGTCGGTAG TACTGGCGGT GGCCGGCGTC
GCCATTCTCA ACGCGTACCG CGGGGGCGAA TCCTCGGGCG CTGCCCCTGC CGATGCGGCG
CAGGCACTGC TGGGCAATGC GCTGGTGATG GGCGCGGTCT TATGCGAATC GATCTACGTG
ATTCTGTCGC GGCGGCTGAC GCAAACCTTG CCCGCTATCG AGATCTGCGC GTACACGCAC
CTGATCGGCG GCCTGCTGAT GCTGCCGCTG GGGCTGATGC CGCTGCTCAC GTTCGATCTG
TCGGGCGTGC CGTTGCCGAT CTGGGGCCTG GTGCTTTGGT ACGCGCTGTC GGCCAGCATC
TTCTCGTTCT GGCTGTGGAT GAAGGGCATT CGGCACGTGC CAGCTCACCT TGCGGGCGTG
TTCACCTCGG TGCTGCCGAT AGCGGCCGCC ACCTATGGCA TCGTGGCGCT GGGCGAAACC
CCGGGCTGGC CGCACGGCAT TGCGCTGGCG TGCGTCGTGG CAGGCATCCT TGTCGCGAGC
TGGCCAGCAC GGCCGCGACA GCCGGCGCGC CGCTCCCGTG TGGCGGACCC GCTGGACCCA
CTCGATCCGT CACTGGACCG CGAATAG
 
Protein sequence
MALVGSNVGF GKSIVAVMPV MLFALLRFLI AIVCMAPWYK PARMRRVTGG EWTNLFLQAF 
FGTFGFTLLM LNGVRLTSAL AAGIITSTIP AAVALLSWLV LREKPSGRTL ASVVLAVAGV
AILNAYRGGE SSGAAPADAA QALLGNALVM GAVLCESIYV ILSRRLTQTL PAIEICAYTH
LIGGLLMLPL GLMPLLTFDL SGVPLPIWGL VLWYALSASI FSFWLWMKGI RHVPAHLAGV
FTSVLPIAAA TYGIVALGET PGWPHGIALA CVVAGILVAS WPARPRQPAR RSRVADPLDP
LDPSLDRE