| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1774 |
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| Symbol | |
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| ID | 8019430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1893414 |
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| End bp | 1895477 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830558 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_002981728 |
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| Protein GI | 241663368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACCG ACTCGCAACA AGACAGCCGC TTCCGCAAGC GGCTGTTTCT GTATTACGGG
CTCTATACCG TAGGGCTGCT GCTCTTCATC GTGATGATGG GCGCGATCGA ACACGTGCGC
GGGCCGGGCG TATGGCTCGG TTATGTGTTC CTGTTCGTCA CCATCGCGAT CTATGCGTGC
ATCGGACTGA TCTGCCGCAC CGCCGATCTA ACCGAGTATT ACGTAGCAGG GCGCCGCGTC
CCCGCATTCT TCAACGGCAT GGCCACGGCG GCCGACTGGA TGAGCGCCGC CTCGTTCATC
GGCCTGGCGG GCATCGTGTT CGCCTCGGGC TATGAGGGCC TCGCTTATGT CATGGGTTGG
ACGGGCGGCT ACTGCCTCGT CGCTTTCCTC CTCGCGCCAT ATCTGCGCAA GTTCGGTGGT
TACACGGTGC CGGATTTCCT AGCCAACCGA TACGGCAACG GCGAGCGCGG CGGAAGTTCT
GTCGTGCGGG GCATCGCGGT GCTGGGCGCT TCGCTGTGTT CCTTCGTCTA TCTCGTCGCG
CAGATCCAGG GTGTGGGGCT GGTGGTCACG CGGTTTATCG GCGTCGAGTT TTCGGTGGGC
GTGTTCTTCG GGCTGGCGGG CATTCTGGTG TGCTCGTTCC TGGGCGGCAT GCGTGCTGTG
ACGTGGACGC AGGTGGCGCA GTACATCATC ATGATCGTGT CCTTTCTGGG CGTGGTGGCG
ATCATCGGTT GGCATCGGTA TCACGATCCG GTGCCGCAGC TTTCTACGGG TCGCCTGCTG
GTGCAGATCG AGAAAGAGGA GCGGCGCATT GCGCACGACC CGGCCGAGCA GCACGTGCGT
GACCACTTTC TGAATGAGGC CAAGGCGCTG CAGGAGCGCA TCTCGCAGTT GCCGCGGTCG
TTCGAGCATG CGCGCGAGGC ATTGAATGCT CAGCTCAAAC TTGCCCGCGA ACGCAACGCG
CCGCTGCGCG AGATCAAGGC GCTGGAGCGC CAGCGCGAAG AGTTTCCGCC GGATGCGGCC
ACCGCGTCGA TCCTTTGGAA CCAGCAGCGC GAAGATGCGC TGGCACGCAG CCGCATGGCG
CCACCGTCCA CCGAACCATT CCCGTCGGCG TCGCAAAACG AGCGGGGCAC CGAGCGACTG
AACTTTGTGC TGCTGGTGTT TTGCCTGATG GTTGGCACGG CCAGCCTGCC GCACATCCTC
ACGCGCTTTC ACACCACGCC GTCGGTGCGC GAGACACGCA ATTCCGTGAG TTGGACGCTG
GTTTTCGTGG CGCTGCTGTA TGTGTCGGCG CCGGCGCTGG CGGCGCTCGT CAAGCTCGAT
CTGTTGCAGC ACCTCGTCGG CACCCCGTTT GCCGACCTGC CGCAATGGGT CGTGCCTTGG
CGCAAGGTCG ACCCGCCCGT GTTTGCGCTG CATGACATCA ACGGCGACGG CATCGTGCAG
TGGGCGGAGG TGATGATGCA GCCGGACATG GTTGTGCTGG CCGCGCCCGA GATTGCCGGG
CTGCCGTACG TGTTGTCGGG CCTGATCGCG GCCGGTGCGC TGGCGGCGGC GCTGTCGACT
GCGGATGGCC TGCTGCTGAC CATCGCCAAT GCGCTGTCGC ACGATGTGTA CTTCCACATG
ATCGACAACA CGGCCAGCCA CCAGCGGCGC GTGACGAGCG CCAAAGTGGT GTTGCTGGGC
GTGGCTCTGT TGGCTGCCTA TGTGACGTCA TTGAAGCCGG GCAACATCCT CTTCCTGGTC
GGGGCAGCCT TCTCGCTGGC GGCGTCCTGC TTCTTTCCGG TATTGGTGCT GGGCGTGTTC
TGGAAGCGCA CCAATCGTGC CGGTGCCATC GCCGGCATGC TGACGGGGCT GGCCGTGAGT
GTGTACTACA TCATCGCCAA CTACCCGTTC TTCACGCGCA TGACGGGTGT ACTCGGCCAG
CCCTGGTTTG GCGTCGATCC GATCGCCTCG GGTGCGTTCG GCGTACCGGC GGGGTTTGTT
GCGGCGATTG TCGTGAGCCT GCTGACCAAG CCGAACCGGC CGGTGGTCGA CAAACTCGTT
GGCTACATTC GCGATCCGCT GTAA
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| Protein sequence | MATDSQQDSR FRKRLFLYYG LYTVGLLLFI VMMGAIEHVR GPGVWLGYVF LFVTIAIYAC
IGLICRTADL TEYYVAGRRV PAFFNGMATA ADWMSAASFI GLAGIVFASG YEGLAYVMGW
TGGYCLVAFL LAPYLRKFGG YTVPDFLANR YGNGERGGSS VVRGIAVLGA SLCSFVYLVA
QIQGVGLVVT RFIGVEFSVG VFFGLAGILV CSFLGGMRAV TWTQVAQYII MIVSFLGVVA
IIGWHRYHDP VPQLSTGRLL VQIEKEERRI AHDPAEQHVR DHFLNEAKAL QERISQLPRS
FEHAREALNA QLKLARERNA PLREIKALER QREEFPPDAA TASILWNQQR EDALARSRMA
PPSTEPFPSA SQNERGTERL NFVLLVFCLM VGTASLPHIL TRFHTTPSVR ETRNSVSWTL
VFVALLYVSA PALAALVKLD LLQHLVGTPF ADLPQWVVPW RKVDPPVFAL HDINGDGIVQ
WAEVMMQPDM VVLAAPEIAG LPYVLSGLIA AGALAAALST ADGLLLTIAN ALSHDVYFHM
IDNTASHQRR VTSAKVVLLG VALLAAYVTS LKPGNILFLV GAAFSLAASC FFPVLVLGVF
WKRTNRAGAI AGMLTGLAVS VYYIIANYPF FTRMTGVLGQ PWFGVDPIAS GAFGVPAGFV
AAIVVSLLTK PNRPVVDKLV GYIRDPL
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