Gene Rpic12D_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1767 
Symbol 
ID8019422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1883125 
End bp1885422 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content67% 
IMG OID644830550 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_002981721 
Protein GI241663361 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.865117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.230329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA AGACTACAAA ACCGCGCAGC GGACGCCGCC GTTTCCTGCT CGGCGCCCTC 
GGCATCGGTG GCGCACTCGT CGTCGGTTGG GGCGTGATGC CGCCGCGCAG CCGCGTGGGC
GATCCGGACA TCTTCCCCGA GCACAATGGC GAGATTGCCC TGAACGGCTG GATCAAGATC
ACACCCGAAG GCGACGTCGT GCTCGCCATG CCGCGTGTGG AGATGGGCCA GGGCATCCAC
ACCGCGCTGT CGATGCTGGC GGCCGAAGAG CTGGACATTC CGCTCGCGCG CGTGCGCATC
GAAAGCGCGC CGGTGGAGCG CATTTACGGC AACGTCGTCG CCATGGGTGA CAGCTCATTG
CCGCTGCATC CCGATAGCGC GGACAAGACC TGGGCACGCG CACTGCACTG GATCATGGCC
AAGAGCGCGC GTGAGATCGG GCTCATCATC ACCGGCGGTA GCAGCAGCAC CGCCGATGGC
TGGCAGCCCG TGCGCGAGGC CGCCGCCACG GCGCGTGCAG CGTTGGTGCA AGCCGCCGCG
CGCGAATGGA ACGTGCCGGC TGCAGACGTC AGCATCCGTG AAGGCCAGTT GATCGGGCCC
GGCGGCAAAC AGTCTACGTT CGGCGAGATG GCCAAGTCGG CGCGCGGTAT TTCTGCGCCG
TCCAACGTGA CGCTCAAGCC GGCTTCGCAA TTCCGGTTGA TCGGCAAACC GGCGCCGCGC
AACGATCTCG CTGCGAAGAC GGATGGCAGC GCGCGTTTCT CCATCGACAC GCGCCTGCCC
GGCATGCTGT ATGCCGCGGT CGTGATGTGT CCGGTGTTTG GCGGCAAGCT CAAGACGTTC
CAGTCGAAAG CGGCGCTTGG CATGCCGGGC GTGCGTTACG TGGTGCCGTT CGAGGGCGCA
GGCGGCGGCG CGCCGGGCGT GGCCGTCGTG GCAGACCATT ACTGGCAGGC CCGGCAGGCG
CTCGCAACGC TCGAACCCGT GTGGGACAAC GGCCCGCATG CCAAGCTCGA TTCCGCAGGC
ATTCGGCAGC AGCTCGTCAG CGCGCTAGAC AGCGACAAGG GCGGCTTCAC GTATCGATCG
ACGGGCGACG GCCTGAAAGC CTTCGACAAG ACCGATGGCG CCACCATCGT CGAGGCCGAG
TACACCGCGC CGTATCTTGC GCACGCCACG ATGGAGCCGA TCAACTGCAC CGCGCAGGTG
ACGTCGGAGG GCGTGCATCT CTGGGCGCCG ACGCAGGTCG CCACGCTGGC GCAGCTGGTA
GCGGCGCGCG CGGCCGGGGT GAGCGGCGAC AAGGTCCACA TCGACATCCC CCTCATCGGC
GGCGGTTTCG GGCGACGGCT GGAATCGGAC TTCATCGGCC AGGCCGTGAC CATCGCCACC
AAGACCGAAG GCAAGCCCGT GCAGGTGATC TGGTCGCGCG AGGAAGACGT CCGCCACGAC
TTCTATCGCC CGCACGCCAT CGCCCGGCTC AAGGCGCGTG TCCAGAACGG CAAGGTCACC
GCGATTGCTT CGCGCAGCGC CGGCCAATCG ATTCTCGCGG GTGAGCTGGA TCGACTGTTC
GGTGCGCCGT CAGCGGGCAT CGATCGCTAC ACCGCCGAAG GCCTGTTCGA CCTGCCGTAC
GAGATCGAAC ACGAGCACAT CGCGCACCTG GCAGTCGATC TGCCGGTTCC CGTGGGCTTC
TGGCGCAGCG TGGGGCACTC GTACAACGGG TTCTTCATGG AGGGCTTTCT CAACGAGGTG
GCGGCCCAGG CCAAGCTTGA TCCGCTGGCG ATGCGGCGCG AGTTGCTGAA GGACCATCCG
CGCGAGCTGA AGGTGCTGGA CACGGCAGCG CAGGCCGCCG GCTGGGGGCA GCCGCTGGCA
CCAGCCGCCG ACGGTGCGCC GCGTGCGCGC GGCATAGCGC TGCATCCGAG CTTCGGTTCC
GTGGTCGCGC AGGTGGTAGA GGTGTCGATC AAGGATGGCA AACCGCGTGT GCATCGCGTT
GTATGTGCGG TCGATTGCGG CACGGTGGTC AACCCGGGCA TCGTTGCGCA GCAGATGGAA
AGCGCGGTCA TCTTTGGTCT GTCGGCGGCG CTGTATGGCC GGATCGACAT CAAGGACGGG
CAGATCGTGC AGTCGAACTT CACCGACTAC CCGGCGCTCA AGATGGCCGA GACACCCGTC
ATCGAAACGC ACATCGTGCC GAGCACGGCG GAGCCCAGCG GCATGGGCGA GGTGGGAGTC
CCACCCATCG CGCCGGCCGT GGCGCACGCC GTGGCCCAGT TGACCGGTAA GCCGGTGCGG
CAGTTGCCAA TGGTGTGA
 
Protein sequence
MNAKTTKPRS GRRRFLLGAL GIGGALVVGW GVMPPRSRVG DPDIFPEHNG EIALNGWIKI 
TPEGDVVLAM PRVEMGQGIH TALSMLAAEE LDIPLARVRI ESAPVERIYG NVVAMGDSSL
PLHPDSADKT WARALHWIMA KSAREIGLII TGGSSSTADG WQPVREAAAT ARAALVQAAA
REWNVPAADV SIREGQLIGP GGKQSTFGEM AKSARGISAP SNVTLKPASQ FRLIGKPAPR
NDLAAKTDGS ARFSIDTRLP GMLYAAVVMC PVFGGKLKTF QSKAALGMPG VRYVVPFEGA
GGGAPGVAVV ADHYWQARQA LATLEPVWDN GPHAKLDSAG IRQQLVSALD SDKGGFTYRS
TGDGLKAFDK TDGATIVEAE YTAPYLAHAT MEPINCTAQV TSEGVHLWAP TQVATLAQLV
AARAAGVSGD KVHIDIPLIG GGFGRRLESD FIGQAVTIAT KTEGKPVQVI WSREEDVRHD
FYRPHAIARL KARVQNGKVT AIASRSAGQS ILAGELDRLF GAPSAGIDRY TAEGLFDLPY
EIEHEHIAHL AVDLPVPVGF WRSVGHSYNG FFMEGFLNEV AAQAKLDPLA MRRELLKDHP
RELKVLDTAA QAAGWGQPLA PAADGAPRAR GIALHPSFGS VVAQVVEVSI KDGKPRVHRV
VCAVDCGTVV NPGIVAQQME SAVIFGLSAA LYGRIDIKDG QIVQSNFTDY PALKMAETPV
IETHIVPSTA EPSGMGEVGV PPIAPAVAHA VAQLTGKPVR QLPMV