| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1766 |
|---|
| Symbol | |
|---|
| ID | 8019421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1882463 |
|---|
| End bp | 1883053 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830549 |
|---|
| Product | uncharacterized peroxidase-related enzyme |
|---|
| Protein accession | YP_002981720 |
|---|
| Protein GI | 241663360 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.44027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.472183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA TCATCCGCGC CCACGGCTTC ACCAACGAAT CGCTCGAGTG GCAAGCGTGG
CTCGATGTGG TCGACCTCGA CCGTGCCACG CCCGAGCAGA TCGCCGTACT CGAAGAGAGC
CATCCGAAGG CGAAAACGTC CGACTACTAC CGGTTTCTCG TTCACCAGCC CGAGATCCTG
CGTCAGCGCT CGGCGGCGTT CAACGCGATC ATGTATGCCC CGGGCGGCCT GTCGCGCGCT
GAACGCGAAC TCGCCAGCGC AGTGGTGTCC CGCGTCAACG GCTGCGTGTA TTGCGCATCC
GTCCACGCAC AGCGCTTCGA GCAGCTTGCC AAGCGCAACG ACGTGATCAA GCAGGTCTTT
GAAGACCCGC ACATCGCGGG CACGAACGCG CGCGAGCGTG CCATCGTGCT GTTCTCGATC
GACCTGACAC TGCGCCCCGG CGACGTGCGC GGCGAAGACC TGAAACCGCT CAAGGACGCT
GGCCTGACCG ACGCAGAAAT TCTCGACTTG ATACACGCCG TGGCCATCTT TGCCTGGGCG
AATCGGCTGA TGCTGAATCT GGGCGAGCCG GTGTTTCCGG GCGCGGCCTG A
|
|---|
| Protein sequence | MTEIIRAHGF TNESLEWQAW LDVVDLDRAT PEQIAVLEES HPKAKTSDYY RFLVHQPEIL
RQRSAAFNAI MYAPGGLSRA ERELASAVVS RVNGCVYCAS VHAQRFEQLA KRNDVIKQVF
EDPHIAGTNA RERAIVLFSI DLTLRPGDVR GEDLKPLKDA GLTDAEILDL IHAVAIFAWA
NRLMLNLGEP VFPGAA
|
|---|
| |