| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1763 |
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| Symbol | |
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| ID | 8019418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1877949 |
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| End bp | 1878950 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830546 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002981717 |
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| Protein GI | 241663357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.113914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.253617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTACGC CGCTCGTTGA ACTCAAGCAG GTCAGCAAAC GCTTTGGCGA TCGCAAGGTC
GGTGCGGGTG ATCGCGTCTT GCAACGCTTT GGCCTGGCGC ATCCGCCTGC AATCGTTCGT
GCTGTTGATG GCGTCGACCT TGCGATCCAA CCAGGTGAAG TTGTCGGCCT CGTCGGCGAA
TCGGGCTGCG GCAAATCCAC CCTCGGCCGC ATTGCTGCGG GCCTGATGCC GCCCTCGGCC
GGCGAGGTGC GCGTGGACGG CAAGGCCATC GACATGCTCA CGGCAGACGA AGCCCGCGCG
GCCCGCCTGA AGATCCAGAT GATCTTCCAG GACCCGTACG CCAGCCTCAA CCCCCGCCTG
CGCGTGGAAG AAATCGTTGG CGAAGCGGCG CGCGTGCATG GCCTGACCGA CCGCGCCAAC
TTTGCCGATT ATGTGGCCGC GCAGATGCAA CGCGCCGGCC TGGACCCCGC CCTGCGCGAC
CGCTACCCGC ATCAGTTCAG CGGCGGCCAG CGCCAGCGCA TCGGCATTGC GCGTGCGCTG
GCGGTGCAGC CTTCGATGCT GGTTTGCGAC GAAGCGGTGG CAGCGTTGGA CGTGTCGATC
CAGGCGCAGA TCCTGAACCT GTTCATGGAC CTGCGCGAGC AGCTCAACCT GACCTACCTG
TTCATCAGCC ACGACCTGGG TGTGGTGGAA CACCTGTCCG ACCGGGTGGT GATCATGTAC
CTCGGCCGCG TGGTGGAATC GGCTCCGGCG GAGGAAGTCT TCCGCCGCCC GAACCATCCT
TACACGCAGA CCTTGCTGGC GGAGATTCCG CGCCTGTCGG CCCGGCACAA GACATTCACC
GCCATTCAAG GCGAGATGCC GAGCCCGCTG CATCCGCCTA CGGGCTGCCA TTTCCATCCG
CGCTGCCCGC ACGCCATGCC CCGCTGCAAG ACCGAGACGC CGACGCTGCG CGGCATTGCG
GTCAACCACA TCAGCGCCTG TCATTTGAAC GACGCGACCT GA
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| Protein sequence | MSTPLVELKQ VSKRFGDRKV GAGDRVLQRF GLAHPPAIVR AVDGVDLAIQ PGEVVGLVGE
SGCGKSTLGR IAAGLMPPSA GEVRVDGKAI DMLTADEARA ARLKIQMIFQ DPYASLNPRL
RVEEIVGEAA RVHGLTDRAN FADYVAAQMQ RAGLDPALRD RYPHQFSGGQ RQRIGIARAL
AVQPSMLVCD EAVAALDVSI QAQILNLFMD LREQLNLTYL FISHDLGVVE HLSDRVVIMY
LGRVVESAPA EEVFRRPNHP YTQTLLAEIP RLSARHKTFT AIQGEMPSPL HPPTGCHFHP
RCPHAMPRCK TETPTLRGIA VNHISACHLN DAT
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