Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1762 |
Symbol | |
ID | 8019417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1876948 |
End bp | 1877952 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830545 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002981716 |
Protein GI | 241663356 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.389781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.264761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGT CCACCAACGC GACCACCCTC GAAGTCCGCA ACCTGCGCAC GCATTTCTTC ACACGTGAAG GCGTACTGCC GGCGGTGGAC GATGTGTCGT TCTCGCTCGC GCGCGGGCGC ATCCTCGGGC TGGTGGGCGA ATCCGGCTCA GGCAAGTCTG TCACCGGTTT CTCCATCATG GGCCTGGTGG ACCCGCCCGG CCGTGTGGTC GGCGGCGAGA TCCTCTACCA GGGCCGCGAT CTCACCAAGC TCGCCCCGCG CGAATTGCGC AAGCTGCAGG GCAACCGCAT CGCCATGGTC TTCCAGGACC CGATGATGAC GCTCAACCCC GTGCTGCGCA TCGATGCCCA GATGATAGAG GCCGTGCGCG CGCACAGCAG CATGAGCCAC AAGCAGGCGT GGGACCACGC GCGCGACACG CTCGGCCTGA TGGGCATTCC AAGCCCAGAA GAACGGCTGC GGGCGTATCC GCATCAGCTT TCGGGCGGCA TGCGCCAGCG CGTGGCCATT GCCATTGCGA TGCTGCATCG GCCCGACCTG ATCATTGCCG ACGAACCGAC CACGGCGCTG GACGTGACCA TCCAGGCGCA GATCCTGTCC GAAGTGCAGA AGCTCGCGCG CATGCACGGC ACGGCGCTGA TCTGGATCAC GCATGACCTG TCTGTCGTGG CCGGCCTGGC TGACGAGGTG GCTGTGATGT ACGCCGGGCG CATCGTCGAA CACGGTCCCG TCGATGCCGT GCTCGATGCC CCGCTGCACC CCTACACCGT GGGCCTGATC GACAGCCTGC CCAGCGAGAA CCGCCGCGGC CAGCGCCTGC GCCAAATTCC CGGGATGACG CCGAACCTGC TGTCGCTGCC GGCAGGCTGC GCGTTTGCAG CACGCTGCCC GCGCGCCACC GAGGTCTGCG GCGTCGCGCC GGAAATCACG CAACCGCTGC CGGGGCGCCT CGTCCGCTGC TTCCATCCCG GCGCGCAGCA CGCGTCCTCG CGGGAGGTCG CGTGA
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Protein sequence | MMASTNATTL EVRNLRTHFF TREGVLPAVD DVSFSLARGR ILGLVGESGS GKSVTGFSIM GLVDPPGRVV GGEILYQGRD LTKLAPRELR KLQGNRIAMV FQDPMMTLNP VLRIDAQMIE AVRAHSSMSH KQAWDHARDT LGLMGIPSPE ERLRAYPHQL SGGMRQRVAI AIAMLHRPDL IIADEPTTAL DVTIQAQILS EVQKLARMHG TALIWITHDL SVVAGLADEV AVMYAGRIVE HGPVDAVLDA PLHPYTVGLI DSLPSENRRG QRLRQIPGMT PNLLSLPAGC AFAARCPRAT EVCGVAPEIT QPLPGRLVRC FHPGAQHASS REVA
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