Gene Rpic12D_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1748 
Symbol 
ID8019402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1863500 
End bp1864321 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID644830531 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002981703 
Protein GI241663343 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.859689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA CCCGGGCCTT TGCATTGACC CATCCCGATC AGCAACGACT TCAGGATCTT 
GACGGCTTTT TCGTTGAGAT CGACCCGACT CGCGAACGCG CGGACATCGT GTTGCACCGC
CCGCCATACA ACGTGATCTC AATGGCCGCC CGCGACCAGC TGCGCGCAGT GTTTGAAGCA
CTGGACGCCG ACGACCGCGT GCGCGTCATC GTCGTGCGTG CGTTGGGCGG GCATTTTTCC
AGCGGCGGCG ATATCAAGGG CTTTCTGGAA GCCTCGCCCG AGCATGTTTC CGAGCTGGCG
TGGAACGTGG CAGCACCGGC ACGCTGCAGC AAACCCGTCA TCGCAGCAAA CCAGGGTTAC
TGCTTTGGTG TGGGCTTTGA ACTGTCGCTG GCGTGCGACT TCCGCATCGC CACCCATACG
ACCGAATACG CGCTACCAGA GCAAAAGCTC GGGCAGATTC CGGGCTCTGG TGGCTCGGCG
CGGCTGCAAA AGATGGTGGG CGTGGGCCGC ACCAAAGACA TCGTAATGCG CTCGCGCCGC
ATTCCCGGCC TCCAAGCGTA CGACTGGGGT ATCGCCGTGG ACTGCGTCGC CGACAGCGAC
CTGACAGCCG TGACTGACGC GCTGGTCGAC GAGTTGCGCG CCTTCTCACC TCTGGCTCAG
CGCACCGCGA AAAAGCTGCT GAACGACACA GAGGACGCAC CTCTGTCGAT CGCTATCGAG
CTGGAGGGGC ACTGCTATAG CCGCCTCCGC AGCTCAGACG ATTTCCGCGA GGGCGTAGAG
GCATTCCATG GAAAACGTAA GCCCGCATTC CGCGGCAGCT GA
 
Protein sequence
MDMTRAFALT HPDQQRLQDL DGFFVEIDPT RERADIVLHR PPYNVISMAA RDQLRAVFEA 
LDADDRVRVI VVRALGGHFS SGGDIKGFLE ASPEHVSELA WNVAAPARCS KPVIAANQGY
CFGVGFELSL ACDFRIATHT TEYALPEQKL GQIPGSGGSA RLQKMVGVGR TKDIVMRSRR
IPGLQAYDWG IAVDCVADSD LTAVTDALVD ELRAFSPLAQ RTAKKLLNDT EDAPLSIAIE
LEGHCYSRLR SSDDFREGVE AFHGKRKPAF RGS