Gene Rpic12D_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1745 
Symbol 
ID8019399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1860562 
End bp1861377 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID644830528 
ProductCarbon-monoxide dehydrogenase (acceptor) 
Protein accessionYP_002981700 
Protein GI241663340 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC CCGCCTTTGA CTATTTGCGC GCAGAGTCCA CGCAGCACGC GCTGGAAGCG 
CTCGCCCATG CAGGTGAAGA CGCCCGTGTA CTCGCCGGAG GCCAGTCGCT GATGGCCGTG
CTGAACATGC GCCTCGCGCA GCCGCAACTG CTGGTCGATA TCTCTCGCAC GCATGATCTG
AACGCCGTGC GAGTTGAAGA AGGCCACCTG GAGGTAAGCG CTGCGGCCAC ACAGGGCACC
GTGGAGTGGC GTCCGTCGCT CGCCAACGAG GTGCCGCTGC TGACGCTGGC TTTCCCGCAC
ATCTCGCATT TCCAGATTCG CAACCGCGGC ACGGTGTGCG GCTCCATTGC CCATGCCGAC
CCGAGCGCCG AGCTGCCACT GGTGCTCACT GCGCTCGACG GACAAGTGGT GCTGCGTTCG
CTGCGCCGCC GCCGCGTGAT GCAGGCCATC GATTTCTTTC AGGGAATGCT GATGACCGCG
CGCGAGCCTG ACGAGCTGGT TGAAGCCGTG CGCTTCCCGT TGCGGCAGCC CGGTGCGCGC
TACGGCTTCA CTGAGTTCTC GGCCCGCCAT GGCGACTTTG CCCTGGTGGC GTGCGCGGCC
ATCGTCACCC ACGATGCCAT CGCCCTTGCC GTGGGCGGAG TAGCAGACCG GCCGGTGCTC
GAGCGTTGGC CGCGCCTGCA AGGCAAGGCA CTTACGGAGG CCATCAACGA TTTCAGTTGG
AAATTGGGCG CGCAAGACGA CGCCCATGTC AGCGCGCAGT ACCGCCGCCA CCTCGTGCGG
CAACTGGGCA TGCGCGCAAT CGAGGAGGCA AGATGA
 
Protein sequence
MKPPAFDYLR AESTQHALEA LAHAGEDARV LAGGQSLMAV LNMRLAQPQL LVDISRTHDL 
NAVRVEEGHL EVSAAATQGT VEWRPSLANE VPLLTLAFPH ISHFQIRNRG TVCGSIAHAD
PSAELPLVLT ALDGQVVLRS LRRRRVMQAI DFFQGMLMTA REPDELVEAV RFPLRQPGAR
YGFTEFSARH GDFALVACAA IVTHDAIALA VGGVADRPVL ERWPRLQGKA LTEAINDFSW
KLGAQDDAHV SAQYRRHLVR QLGMRAIEEA R