Gene Rpic12D_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1743 
Symbol 
ID8019397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1856349 
End bp1857251 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID644830526 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002981698 
Protein GI241663338 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.854551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA AGCAAATTCA GTACTTCATC GCGCTTTTCG AAGAAGGCTC TGTCACGCGG 
GCAGCCAAGC GGTTGAATAT CGTGCAGCCG GCCCTGAGCA TGCAGATAGC CAAGCTCGAG
GATGAGTTCG GACAGAAGCT TTTTGAACGC ATCCCGCACG GTATGGCGCC AACTGCCGCT
GGCCGGATGA TGCACCGACT GTTTCTGCCG ATCGTGCGCG ATCTCGCGAG TGCCCGGCAG
CAGATGATGC AGCGCGAGGA GCATATGGCC GGCCGCATCA CGATCGGCAT GGTGGCTTCC
GAGACAGAGA GCGTGCTGGT CGGAGCCCTG GCACGCTTTA ACGCGAGCTA TCCGAACGTA
GAGGTGTCTG TGGCAGATGG CTTCAGCACG GCACTGATCA ACCTTGTTTC CGCCGGCCAG
CTCGATGCAG CGGTGGTCCA TCGCCAACGT GGTCGGCTGG CGCTGCAGGT GCAGTCGCTG
CATGACGAAG AGATGGTTCT AGTGACCAGC GTCGCAAATG GCCCTGAATT ACCAGAATCG
GTGGAAATGG CGAAGCTGCC TGGACTGGAG CTTGTGTTAC CGACGAAGTC GCACGGCCTG
CGCGTGGTAT TGGATACTGC CACGCAGGCG CATGACGTCA CGCTGGCTCC AAAGTTCGAA
ATTGACATCC TTGGGACCAT CGTGCAGTTC GTTGAAGCTA CGCGTTTCGC CACTGTGTTG
CCGCGCATTG TGGTGCAGCG TGCCGTGGAA GAGGGACGGC TGCGCATGCA TACCATTGTT
GCGCCGCGCA TCGTGCGGCA TCTGGTCTGC GTCAGCCATC CGCAGCGGCC GTTAAGCACG
GCGACCGAGG CGTTGATTGC AATCGTGACC GAAGAAATCA AGCGCGTTTC GGGGATGGCG
TAG
 
Protein sequence
MDLKQIQYFI ALFEEGSVTR AAKRLNIVQP ALSMQIAKLE DEFGQKLFER IPHGMAPTAA 
GRMMHRLFLP IVRDLASARQ QMMQREEHMA GRITIGMVAS ETESVLVGAL ARFNASYPNV
EVSVADGFST ALINLVSAGQ LDAAVVHRQR GRLALQVQSL HDEEMVLVTS VANGPELPES
VEMAKLPGLE LVLPTKSHGL RVVLDTATQA HDVTLAPKFE IDILGTIVQF VEATRFATVL
PRIVVQRAVE EGRLRMHTIV APRIVRHLVC VSHPQRPLST ATEALIAIVT EEIKRVSGMA