Gene Rpic12D_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1741 
Symbol 
ID8019395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1852242 
End bp1853504 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content61% 
IMG OID644830524 
Producthypothetical protein 
Protein accessionYP_002981696 
Protein GI241663336 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA TCATTGATCG GCGGGAGAAC GGTGGCGGCA AGAGCACCGT CAACAAGCAA 
CGCTTCATCA AGCGTTACCG AGACCAGATC CGCCGCGCGG TGGCCAAGGC CGTGACGGGC
CGCAAGATCA TGGACATCGA GCAGAGCGGG CAGGTGTCCA TTCCCGTCAA GGACATCTCG
GAGCCCATGT TCCACCACGG CTCGGGCGGG CGCCGCGAGG GCGTTCACCC GGGCAACAAG
GAGTTCATTC GCGGCGACAG CTTCGACCGC CCGCAGCAGG GCAGCGGCGG TACCGGTTCG
CAAGCCAGCG ACTCGGGAGA GGGCGAAGAC GATTTCATCT TCACGCTCTC GCGCGAAGAC
TTCCTCAACT TCTTTTTCGA AGACATGGCG TTGCCCGATC TTGCCAAGCG CAGCCTGGCC
AAGATCGCGG AGGTGCGCAA GGTGCGCGCG GGCTTCTCGC TCGACGGCAC GCCGTCCAAC
CTGTCGATTC TGCGCACGAT GCGCAGTTCG CTCGGTCGCC GTATCGCGTT GTCCAGCCCG
TATCAGCGCC GCCTGCACGA GCTGGAGCGC GAGTACAACG AAGAACTGGA AAACGACGGC
CCTTACGGCG TGCGCGCGCA AGAGCTGATG AAGGAGATGC GCCATCTGCG CTCCTGCCTG
GATCGCGTGC CGTTCATCGA AAAGCTTGAT CTACGCTACA ACAATCGCGT GCTGCGCAAG
CGCCCACAGG CGCAGGCGGT GATGTTCTGC GTAATGGACG TATCCGGCTC GATGGACGAA
TCGCGCAAGG ACCTGGCCAA GCGTTTCTTC ATGCTGCTGT ATCTGTTCCT GAAGCGGAAC
TACGAGCGCA TCGACGTCGT CTTCATCCGC CACCACACCG TGGCCAAGGA GGTGGATGAG
GAGGATTTCT TTCACTCGCG CGAGTCGGGT GGCACGGTCG TGTCGAGCGC ACTCAAGCTG
ATGGCGGAAG TGATGCAGGA GCGCTATTCG CCGAGCCAAT GGAACATCTA TTGCGCGCAA
GCTTCGGATG GCGACAACTG GGCGGGCGAT TCTGAGCTAT GCGCAAAGCT GCTGCGCGAA
ACGATCCTGC CGCTGACGCA GTATTACGCC TATGTTGAGG TGGTTTCCAC GGAGCCCCAG
AACCTGTGGG AGGAGTATCT TACGTTGAAG GCGGGGCACG ACAACTTCGC GATGCAGCGC
ATTCTCAAGG CGGACGAAAT CTATCCGGTA CTGCACGAGT TGTTTCAGAA GCGCGCTGCC
TGA
 
Protein sequence
MGTIIDRREN GGGKSTVNKQ RFIKRYRDQI RRAVAKAVTG RKIMDIEQSG QVSIPVKDIS 
EPMFHHGSGG RREGVHPGNK EFIRGDSFDR PQQGSGGTGS QASDSGEGED DFIFTLSRED
FLNFFFEDMA LPDLAKRSLA KIAEVRKVRA GFSLDGTPSN LSILRTMRSS LGRRIALSSP
YQRRLHELER EYNEELENDG PYGVRAQELM KEMRHLRSCL DRVPFIEKLD LRYNNRVLRK
RPQAQAVMFC VMDVSGSMDE SRKDLAKRFF MLLYLFLKRN YERIDVVFIR HHTVAKEVDE
EDFFHSRESG GTVVSSALKL MAEVMQERYS PSQWNIYCAQ ASDGDNWAGD SELCAKLLRE
TILPLTQYYA YVEVVSTEPQ NLWEEYLTLK AGHDNFAMQR ILKADEIYPV LHELFQKRAA