Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1735 |
Symbol | |
ID | 8019389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1847188 |
End bp | 1847640 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830518 |
Product | Lysozyme |
Protein accession | YP_002981690 |
Protein GI | 241663330 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0740685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.733452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG AGCACAACCC GCGCACCACC GGCGAGCGAG GCCTCGCGCT GATCAAGGAA TCGGAAGGAC TGCGTCTGTC GACGTATCTG GATGCGGTCG GTAAGCCGAC CATCGGCTAC GGCCATTTGA TCCGGCCTGG CGAGACCTTC AACGGGCCGA TCTCGCAGCA GCAGGCCGAA GCGCTGCTGC GCAAAGACCT GGCCGACACC GAGCAGGGCA TTGCCAAGGC CGTGCGCGTG TCGATTACGC AAGGTCAATT CGACGCACTG GCGTCCTTTG TCTTCAACCT GGGGGCGGGG CGGCTTCGCT CTTCAACGCT GCTGCGCAAG CTCAACGCGG GCGACTACGC CGGCGCGGCC AATCAGTTCC TGCTGTGGGA CAAGGCCGGC GGCAAGCCGC TCAAAGGACT GACGAAGCGC CGCCAGGCCG AACGCAAGTT GTTCCTGTCC TGA
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Protein sequence | MSTEHNPRTT GERGLALIKE SEGLRLSTYL DAVGKPTIGY GHLIRPGETF NGPISQQQAE ALLRKDLADT EQGIAKAVRV SITQGQFDAL ASFVFNLGAG RLRSSTLLRK LNAGDYAGAA NQFLLWDKAG GKPLKGLTKR RQAERKLFLS
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