Gene Rpic12D_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1735 
Symbol 
ID8019389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1847188 
End bp1847640 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content64% 
IMG OID644830518 
ProductLysozyme 
Protein accessionYP_002981690 
Protein GI241663330 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0740685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.733452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG AGCACAACCC GCGCACCACC GGCGAGCGAG GCCTCGCGCT GATCAAGGAA 
TCGGAAGGAC TGCGTCTGTC GACGTATCTG GATGCGGTCG GTAAGCCGAC CATCGGCTAC
GGCCATTTGA TCCGGCCTGG CGAGACCTTC AACGGGCCGA TCTCGCAGCA GCAGGCCGAA
GCGCTGCTGC GCAAAGACCT GGCCGACACC GAGCAGGGCA TTGCCAAGGC CGTGCGCGTG
TCGATTACGC AAGGTCAATT CGACGCACTG GCGTCCTTTG TCTTCAACCT GGGGGCGGGG
CGGCTTCGCT CTTCAACGCT GCTGCGCAAG CTCAACGCGG GCGACTACGC CGGCGCGGCC
AATCAGTTCC TGCTGTGGGA CAAGGCCGGC GGCAAGCCGC TCAAAGGACT GACGAAGCGC
CGCCAGGCCG AACGCAAGTT GTTCCTGTCC TGA
 
Protein sequence
MSTEHNPRTT GERGLALIKE SEGLRLSTYL DAVGKPTIGY GHLIRPGETF NGPISQQQAE 
ALLRKDLADT EQGIAKAVRV SITQGQFDAL ASFVFNLGAG RLRSSTLLRK LNAGDYAGAA
NQFLLWDKAG GKPLKGLTKR RQAERKLFLS