Gene Rpic12D_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1725 
SymbolgreA 
ID8019379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1834550 
End bp1835026 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID644830508 
Producttranscription elongation factor GreA 
Protein accessionYP_002981680 
Protein GI241663320 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB
[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TTCCGATTAC CAAGCGCGGT GCCGAGATGC TGAAAGAAGA GCTTCACCGT 
CTGAAGACCA AGGAGCGTCC GGCCGTCGTC AATGCCATCG CCGAGGCACG TGCCCAGGGC
GATCTTTCCG AAAACGCCGA CTACGATGCT GCCAAGGAGC GCCAAGGCTT CATCGAAGGC
CGCATCCAGG AAATCGAGAG CAAGCTGTCC GCTGCGCAGA TCATCGATCC GGCCTCGCTG
GATGCCGACG GCCGCGTGGT TTTTGGCGCC ACCATCGATC TGGAAGATCT CGATTCGGGC
AAGCCCGTTA CGTATCAGAT CGTCGGCGAT GATGAGGCTG ACCTGGAAAC TGGCAAGATT
TCGATCAGCT CGCCGATCGC TCGTGCGTTG ATCGGCAAGT TCGAAGGCGA TGTCGCTACC
GTGGTCGCCC CGGGCGGCGA GCGCGAGTAC GAAGTGCTGG CCGTCAAGTA CCTCTAA
 
Protein sequence
MSTIPITKRG AEMLKEELHR LKTKERPAVV NAIAEARAQG DLSENADYDA AKERQGFIEG 
RIQEIESKLS AAQIIDPASL DADGRVVFGA TIDLEDLDSG KPVTYQIVGD DEADLETGKI
SISSPIARAL IGKFEGDVAT VVAPGGEREY EVLAVKYL