Gene Rpic12D_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1723 
Symbol 
ID8019377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1833500 
End bp1834000 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content64% 
IMG OID644830506 
Productprotein of unknown function UPF0044 
Protein accessionYP_002981678 
Protein GI241663318 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.794727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC TTATCCTCAC CCCTGCCCAA CGATCGGAAC TGCGCTCAGA AGCGCACGCG 
TTGAACCCGG TCGTCATCAT CGGTGCGGAG GGTCTGACGA AGGCCGTTCT GGCCGAAATC
GACCGCTCGC TGGCGGCCCA CGGGCTGATC AAGATTCGCG TCTTCGGTGA TGATCGCGAA
GCCCGCATCG AACTCTATGA CACCATCTGC GCCCGCCTAC AGGCTGCCCC GGTACAGCAC
ATCGGCAAGC TGCTGGTGAT TTGGCGCGAG GGTCCGGCGT ACCTGAAGGA AAACCAGCCG
CGGGACCTCA AGCCGCCTCG CAAGACGACC GTTGGTGCCG GTCCGCGCTC GGTCACCGTG
CGCAAGCCGA ACCCGAACAG CGCACGCCGC CCGAAACCGG TCCGCCTCAG CGTGTTGGGT
AACGAACGGG TCACGGTCGG CGGTAACGTC AAGCGTGCCA AACCGCGTCA AACCAGCCAG
AAGAAGAAAG CGCTGTCCTG A
 
Protein sequence
MPALILTPAQ RSELRSEAHA LNPVVIIGAE GLTKAVLAEI DRSLAAHGLI KIRVFGDDRE 
ARIELYDTIC ARLQAAPVQH IGKLLVIWRE GPAYLKENQP RDLKPPRKTT VGAGPRSVTV
RKPNPNSARR PKPVRLSVLG NERVTVGGNV KRAKPRQTSQ KKKALS