| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1721 |
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| Symbol | |
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| ID | 8019375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1830708 |
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| End bp | 1832594 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830504 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_002981676 |
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| Protein GI | 241663316 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.54064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATAACA ACTGGTTTCA GAAGGCGGCC ATCTGGCTGG TGATTGCCTT GGTGCTGTTC
ACCGTCTTCA AGCAGTTCGA CAAGCCCCGC GCCCAAGAAG GTGTGACGTA CTCGCAATTC
ATGGACGATG CAAAGGCCGG CAAGGTCAAG CGCGTCGAGG TCCAGGGCCG TACGTTGTTG
GTCACACCGA ACGAGGGCAA CAAGTATTCG ATCATCTCGC CGGGCGACAT CTGGATGGTC
GGCGACCTGA TGAAGTACGG CGTGCAGGTG ACCGGCAAGG CGGAAGAGGA GCAAGGTGTG
CTCCTTACCG CGCTTTACTA CCTCGGCCCG ACGCTGCTGA TCATCGTGTT CTGGTTCTAC
ATGATGCGGC AGATGCAGGG CGGCGGGAAA GGCGGTGCCT TCTCGTTCGG CAAGTCCAGG
GCACGGTTGA TCGACGAGAA CAACAACAGC GTCACGTTTG CTGACGTGGC GGGCTGCGAT
GAATCGAAGG AAGAAGTCGT CGAACTGGTT GACTTCCTGA AAGATCCGCA GAAATTCCAG
AAGCTGGGCG GGCGTATCCC GCGCGGCGTG CTGCTCGTGG GGCCTCCGGG TACCGGCAAG
ACACTGCTGG CGCGCGCCAT TGCCGGCGAG GCCAAGGTGC CGTTCTTTAG CATTTCCGGT
TCGGACTTCG TTGAAATGTT CGTTGGCGTG GGCGCAGCCC GCGTGCGCGA CATGTTTGAA
AACGCCAAGA AGCAGGCGCC CTGTATCGTG TTCATCGATG AGATCGATGC GGTTGGCCGC
CATCGTGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGCG AGCAGACCCT GAACCAGATG
CTGGTCGAGA TGGACGGCTT CGAGGCCAAC TCGGGCGTCA TCGTGATCGC GGCAACCAAC
CGTGCAGACG TGCTCGACAA AGCGCTGCTG CGTCCTGGCC GCTTCGACCG TCAGGTCTAC
GTGGGACTGC CGGATATCCG TGGCCGCGAG CAGATTCTCA AGGTCCACAT GCGCAAGGTG
CCGATCGGCA ACGACGTCGA TGCATCGGTG TTGGCGCGTG GCACGCCGGG CTTTTCGGGC
GCCGATCTCG CCAACCTGGT GAACGAAGCA GCGCTGTTTG CTGCACGCCG CAACAAGCGC
GTGGTGGACA TGCAGGACTT CGAAGACGCG AAGGACAAGA TCTACATGGG TCCGGAGCGC
AAGTCGGCCG TGATCCGCGA AGAGGAGCGC CGCGCTACGG CGTACCACGA GTCGGGCCAT
GCGGTGGTGG CGAAGCTGCT GCCGAAGGCT GATCCGGTGC ACAAGGTCAC GATCATGCCG
CGCGGCTGGG CTGGCGGTCT GACCTGGCAG CTGCCGGAGC ACGACAAGCA CTACGCCTAC
AAGGACACGA TGCTCGAAGA GGTCGCGATC CTGTTTGGTG GCCGTGCCGC AGAAGAGGTG
TTCCTGGGTG CGATGAGTAC CGGTGCCTCT AACGACTTCG AGCGCGCCAC CAAGATGGCC
CGCGATATGG TGACGCGCTA TGGCATGAGC GACGCGCTTG GCACTATGGT TTACGTCGAT
ACGGAACAGG ATGGCTTCTT CGGTCGCATG GCATCGAAGA CGGTGTCCGA GGCGACTCAG
CAGAAGGTGG ATTCGGAAAT CCGCCGCATC GTGGACGAGC AGTACGCCCT GGCCAAGGGG
CTGCTGGAAG CGAATCGCGA TAAGGTGGAA GCCATGACTG CGGCGCTGCT CGAGTGGGAA
ACCATCGACG CCGATCAGGT CAATGACATC ATGGACGGCA AGCCGCCGCG CCCGCCGCGC
TACGGCTCGA CCGGCGGTGG CAGCACCCCG CCGGGTGGAG GCACGCCGGC TGGGGTGAAC
CCGGGCAACG TGCCTGCCAC GGCCTGA
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| Protein sequence | MNNNWFQKAA IWLVIALVLF TVFKQFDKPR AQEGVTYSQF MDDAKAGKVK RVEVQGRTLL
VTPNEGNKYS IISPGDIWMV GDLMKYGVQV TGKAEEEQGV LLTALYYLGP TLLIIVFWFY
MMRQMQGGGK GGAFSFGKSR ARLIDENNNS VTFADVAGCD ESKEEVVELV DFLKDPQKFQ
KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE
NAKKQAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN
RADVLDKALL RPGRFDRQVY VGLPDIRGRE QILKVHMRKV PIGNDVDASV LARGTPGFSG
ADLANLVNEA ALFAARRNKR VVDMQDFEDA KDKIYMGPER KSAVIREEER RATAYHESGH
AVVAKLLPKA DPVHKVTIMP RGWAGGLTWQ LPEHDKHYAY KDTMLEEVAI LFGGRAAEEV
FLGAMSTGAS NDFERATKMA RDMVTRYGMS DALGTMVYVD TEQDGFFGRM ASKTVSEATQ
QKVDSEIRRI VDEQYALAKG LLEANRDKVE AMTAALLEWE TIDADQVNDI MDGKPPRPPR
YGSTGGGSTP PGGGTPAGVN PGNVPATA
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