Gene Rpic12D_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1714 
Symbol 
ID8019368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1823456 
End bp1824169 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID644830497 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_002981669 
Protein GI241663309 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0605857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.609426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA AGCATCTGTC ATCGCAGTTT GACACCGACC TGACCACCAT CAGCACCAAG 
GTGCTGCAGA TGGGCGGTCT GGTGGAAGCG CAGATTGCCC GCGCGATGCG CGCGCTGGCC
AACTTCGACA CCGCGATGTG CGATCAGGTG CTCGCGGTGG AGCAGGAGAT CAATGCGCTC
GAGATCGAGA TCGACGGCGA CTGCAACAAC ATCATTGCGC GCCGCCAGCC GACCGCCCGC
GACTTGCGTC TGGTCATGGC TATCTCGAAG ACCATTACCA ATCTGGAGCG CGCCGGTGAC
GAGGCCGCAA AGATTGCGAA GCGCACCAAA CGTCTCATGC AGGACCCGTC CGCACACGCG
CTGAACTACG CAGGCGTGGA TCGCTCGGGC GAGATGGCCG CAACCATCCT GCGCCACGCG
CTTGACGCCT TCGCGCGCCT GGACACCACT GCCGCCGTGT CGATCCTGCA GGAAGACAAG
GCCATCGATG AGGAATTCCG CGGCTTCATG CGCGAACTCA TCACGTACAT GATGGAGAAC
CCGCGCACGA TTTCGGTGGC GCTGGATCTG CTGTTCATTG CGAAGGCCAT TGAACGTATC
GGCGATCATG CCAAGAACAT CGCCGAGTTT ATTATCTATA TCGTCAAGGG AACCGACGTC
CGGCATGCCG GGCGCGAGGC GCTGGAGCGC GAGATCCTGG GCGAAGGCGA ATAA
 
Protein sequence
MSEKHLSSQF DTDLTTISTK VLQMGGLVEA QIARAMRALA NFDTAMCDQV LAVEQEINAL 
EIEIDGDCNN IIARRQPTAR DLRLVMAISK TITNLERAGD EAAKIAKRTK RLMQDPSAHA
LNYAGVDRSG EMAATILRHA LDAFARLDTT AAVSILQEDK AIDEEFRGFM RELITYMMEN
PRTISVALDL LFIAKAIERI GDHAKNIAEF IIYIVKGTDV RHAGREALER EILGEGE