| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1684 |
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| Symbol | |
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| ID | 8019337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1790661 |
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| End bp | 1793357 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830466 |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_002981639 |
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| Protein GI | 241663279 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0244969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTT CACGTCAGGC GCTATTTGGC CGACTCAATC CGAGTCTTTT CAAGGCAATC
GAAAGCGCGA CCGCCTTCTG CAAGCTCCGT GGCAACCCAT ACGTCGAACT CGTGCACTGG
TTGCATCAGC TACTGCGAGC ATCCGATGGC GACCTGCAGC GCGTGCTGAG GCATGCCGAA
GTCGACTTGC AGGCACTTGA GGCTGATCTT GCGCGTGCAC TAGCTTCGCT CCCGACTGGC
GCCAGTTCCA TCAGCGATTT CTCCTTCCAG ATCGAAGCTG CCGTCGAGCG CGCCTGGGTG
TATGCCACGC TTGCTTTTGC CGATGATCGC GTGCGCGGTG CGTACCTCCT GACGGCACTG
CTCAAGACGA CGGAGCTGCG CCGCACTGTG CTCAGTATCT CCAGCCAGTT CGCCAAGGTC
CGTGCGGATG ATCTGGTCGA CAGCATCCCG GGACTGATTG CGCAATCTCC CGAGAGTCAG
GAAGCGGCCT ACGATGGTAG TGGTCTCGCA TCCGCCATTC CGGGCGAAGC GAGTGGAGCG
GTTAGCCCTA CCGGTACGGG CAAGAGCGCA CTCGCCCAAT ATTGCCGCGA CCTAACAGAA
GCCGCACGGG AAGGGCAGCT TGATCCCGTC ATCGGTCGCG AGCACGAAAT CCGCACCATG
ACGGACATCC TGCTGCGCCG TCGCCAGAAT AACCCGTTGC TGACCGGTGA GGCCGGCGTT
GGCAAAACGG CCGTGATCGA AGGCCTGGCC CAGGCTATCG CCGTGGGCGA CATTCCCCCG
AGTCTCAAAG ACGTCCGTCT GCTCAGCCTA GACGTTGGTG CACTGCTGGC GGGCGCCAGC
ATGAAGGGCG AGTTCGAAGC CCGCTTGAAG GGCGTGCTGG AAGAGGCCGC CAAGTCGGCC
AAGCCCGTCA TCCTGTTTGT TGACGAAGTG CATACCCTCG TCGGCGCAGG CGGCCAAGCC
GGCACGGGTG ACGCCGCCAA CCTACTCAAG CCCGCACTCG CCCGCGGGGC CCTGCGCACG
ATCGGCGCGA CTACGTGGAG CGAGTACAAG CGCCACATCG AAAAAGACCC CGCGCTCACC
CGCCGCTTCC AAGTCCTGCA AGTCTTGGAG CCGCAAGAAG CCAGCGCCGT CGCCATGGTG
CGCGGTCTGG TAGACACCTT CGAGACCCAC CACAAGGTCC TGATCCTTGA CGAAGCCGTA
CGTGCCGCCG TCAAGCTCTC GCACCGCTAC ATCCCCTCGC GCCAGTTGCC CGACAAGGCC
ATCAGCCTGT TGGATACGGC ATGCGCGCGT GTTGCCTTGA CGCTGCACGC ACCGCCTGCT
GCCGTGGAGT TGGCGCGCCA GCGTCTGGCT GCGGCCCAAG CCGACTCGGC CTTGCTTGCC
AAGGAAGCTG CGTTCGGTAA GGAAGATCGT CGCCGTATTG CCGAGATTGA CAGCGCGATC
TGCGAGATCA CGACCGAACT TGCCCAAGCC GAAGCCCGCT GGCAGCAGGA GAGGGCACTC
GCCACCAGCA TTCTTGAACA GCGGCAGGCC ATCGAAGCTG CGGCGGAAGA GACGAGCCAA
TCGCCAGCCG CACTGATCGA CCTCGAAGCC GAGTTGCAGT CCGTCCAAGG CGAGACACCG
TTGGTGTACA CCGAGGTGGG TGAAGCCGTG GTGGCTGCCA TCGTGGCTGA CTGGACTGGC
ATCCCCGTCA CCCGCATGGT GGCTGATGAA GTCGCCACCG TGATGGCCCT ACCGCAAACA
CTGGGTGCAC GCATCATCGG CCAGGACCAC GCGCTTGCGC AGCTTGGCGA GCGTATCCAG
ACCGCCCGTG CCCAGCTGAC CGACCCCAAC AAGCCCGTCG GCGTGTTCCT GCTGGTGGGC
CCCTCCGGTG TCGGCAAGAC CGAAACCGCA TTGGCGCTGG CCGACGCGCT CTACGGTGGC
GAGCAAAACC TCATCACCAT CAACCTCTCC GAATTCCAGG AGTCGCACAC CGTATCCACG
CTCAAGGGTG CGCCGCCGGG CTATGTCGGC TATGGCGAGG GTGGGGTACT GACCGAAGCC
GTCCGCCGCC GTCCCTACAG CGTCGTGCTG CTCGACGAGG TGGAAAAGGC TCACCCAGAC
GTGCATGAAG TCTTCTACCA AGTCTTCGAC AAAGGCTATA TGGAAGATGG GGAAGGGCGC
CACATTGACT TCAAGAACAC CATTCTCCTG CTGACGAGCA ACGCCGGTTC CGACCTGCTG
ACCAGCTTGT GCGACGACCT CGCGCTGTTG CCGGAGCCGG CGGCACTGCG CGATGCGCTC
ATGCCCGAGC TGCGCAAGAC GTTCCCCGCC GCATTCCTCG GTCGCCTAGT GGTGGTGCCA
TACCTGCCGT TGGCCGCCGA CAACCTCGGC CGCATCGTCC ACCGGCACCT AGACCGCGTG
GTCAAGCGCA TGCGTGAGCA GCACGACATC GCGCTCACCT ATGACGACGC CGTGGTGACG
CACATCGTTG AGCGCTGCCC GGTCGGCGAA ACCGGTGCAC GCCAGTTGAT CGGCTTGATC
GAGCAAGTTA TCCAGCCGCA ACTGGCCAAG CTCTGGCTGG GCGCGCTGGC CGACAAGCGT
CCTCTCGCCG CCATTGAAAT CCGTATGGCC GACGACGCAT CCACATTGAT CTACCACCCC
GAATACCTGA CCGGCCGCAG CGCAGGGCCG GCCATTCCCA CCGCCGAACC GGTCTGA
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| Protein sequence | MEISRQALFG RLNPSLFKAI ESATAFCKLR GNPYVELVHW LHQLLRASDG DLQRVLRHAE
VDLQALEADL ARALASLPTG ASSISDFSFQ IEAAVERAWV YATLAFADDR VRGAYLLTAL
LKTTELRRTV LSISSQFAKV RADDLVDSIP GLIAQSPESQ EAAYDGSGLA SAIPGEASGA
VSPTGTGKSA LAQYCRDLTE AAREGQLDPV IGREHEIRTM TDILLRRRQN NPLLTGEAGV
GKTAVIEGLA QAIAVGDIPP SLKDVRLLSL DVGALLAGAS MKGEFEARLK GVLEEAAKSA
KPVILFVDEV HTLVGAGGQA GTGDAANLLK PALARGALRT IGATTWSEYK RHIEKDPALT
RRFQVLQVLE PQEASAVAMV RGLVDTFETH HKVLILDEAV RAAVKLSHRY IPSRQLPDKA
ISLLDTACAR VALTLHAPPA AVELARQRLA AAQADSALLA KEAAFGKEDR RRIAEIDSAI
CEITTELAQA EARWQQERAL ATSILEQRQA IEAAAEETSQ SPAALIDLEA ELQSVQGETP
LVYTEVGEAV VAAIVADWTG IPVTRMVADE VATVMALPQT LGARIIGQDH ALAQLGERIQ
TARAQLTDPN KPVGVFLLVG PSGVGKTETA LALADALYGG EQNLITINLS EFQESHTVST
LKGAPPGYVG YGEGGVLTEA VRRRPYSVVL LDEVEKAHPD VHEVFYQVFD KGYMEDGEGR
HIDFKNTILL LTSNAGSDLL TSLCDDLALL PEPAALRDAL MPELRKTFPA AFLGRLVVVP
YLPLAADNLG RIVHRHLDRV VKRMREQHDI ALTYDDAVVT HIVERCPVGE TGARQLIGLI
EQVIQPQLAK LWLGALADKR PLAAIEIRMA DDASTLIYHP EYLTGRSAGP AIPTAEPV
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