| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1683 |
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| Symbol | |
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| ID | 8019336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1790070 |
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| End bp | 1790609 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830465 |
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| Product | type VI secretion protein, VC_A0107 family |
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| Protein accession | YP_002981638 |
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| Protein GI | 241663278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0225402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTG TGAACAGTTC GCAGAAATTC ATCGCGCGCA ACCGCGCACC GCGCGTCCAG
ATCGAGTACG ACGTCGAAGT CTACGGCTCG GAGAAACGGA TCGAGTTGCC TTTCGTGATG
GGCGTGTTGG CCGACCTGTC CGGGAAGCCG GCTGAGCCGC TGCCTTCGGT GGCCGATCGC
AAGTTCCTCG AAATAGATAT CGACAACTTC GACGAGCGCA TGAAAGCCAT GAAGCCGCGC
GTTGCGTTTG CTGTGCAGAA CACGCTCACC GGCGAAGGCC AACTGATGGT CGACATGACC
TTCGAGAGCA TTGAAGACTT CTCGCCCGCC GCGGTCGCCG GCAAGGTAGA CGCGCTTAAG
CAACTGCTCG AAGCCCGGAC GCAGCTGGCC AACCTGCAGA CCTACATGGA CGGCAAGTCC
GGCGCCGAGT CGCTCATCAA CCAACTGCTG CAAGACCCGG CCCTGCTGCA AGCACTGGCC
AAGGCACCGA AGCCCGAGGT GACGCCGGTT CAAGCCGGGA CCGAGCAGAC CGACGCCTGA
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| Protein sequence | MSVVNSSQKF IARNRAPRVQ IEYDVEVYGS EKRIELPFVM GVLADLSGKP AEPLPSVADR
KFLEIDIDNF DERMKAMKPR VAFAVQNTLT GEGQLMVDMT FESIEDFSPA AVAGKVDALK
QLLEARTQLA NLQTYMDGKS GAESLINQLL QDPALLQALA KAPKPEVTPV QAGTEQTDA
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