Gene Rpic12D_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1677 
Symbol 
ID8019330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1782894 
End bp1783169 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content66% 
IMG OID644830459 
ProductPAAR repeat-containing protein 
Protein accessionYP_002981632 
Protein GI241663272 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.954396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00616072 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGCAC AAATCATCAC CGTAGGCGAC GTTGGTGACC ATGGCGCCGT CGTCATCACC 
GGCTCGCCCA CCAGCAAGAT TCGAGGCCGA GCCATCGCCC GCCTGGGCGA TCTCGTTAAA
TGCCCCGGCC ACTACCCGGA CGGTCGCCCA CACGGCATCA ACCGCATCGT GCGCGTGTCC
GGCACCGCTA AGGTCGGCGG CAGCATCATG GCCCGCGCCG GTGACGGCAC CGAATGTGGA
TGCACTCTGA TCGGCAGTCA GCCTGCCCGA GCATGA
 
Protein sequence
MSAQIITVGD VGDHGAVVIT GSPTSKIRGR AIARLGDLVK CPGHYPDGRP HGINRIVRVS 
GTAKVGGSIM ARAGDGTECG CTLIGSQPAR A