Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1677 |
Symbol | |
ID | 8019330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1782894 |
End bp | 1783169 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830459 |
Product | PAAR repeat-containing protein |
Protein accession | YP_002981632 |
Protein GI | 241663272 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.954396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00616072 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGCAC AAATCATCAC CGTAGGCGAC GTTGGTGACC ATGGCGCCGT CGTCATCACC GGCTCGCCCA CCAGCAAGAT TCGAGGCCGA GCCATCGCCC GCCTGGGCGA TCTCGTTAAA TGCCCCGGCC ACTACCCGGA CGGTCGCCCA CACGGCATCA ACCGCATCGT GCGCGTGTCC GGCACCGCTA AGGTCGGCGG CAGCATCATG GCCCGCGCCG GTGACGGCAC CGAATGTGGA TGCACTCTGA TCGGCAGTCA GCCTGCCCGA GCATGA
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Protein sequence | MSAQIITVGD VGDHGAVVIT GSPTSKIRGR AIARLGDLVK CPGHYPDGRP HGINRIVRVS GTAKVGGSIM ARAGDGTECG CTLIGSQPAR A
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