Gene Rpic12D_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1661 
Symbol 
ID8019313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1765238 
End bp1766620 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content66% 
IMG OID644830442 
ProductO-acetylhomoserine aminocarboxypropyltransferase 
Protein accessionYP_002981616 
Protein GI241663256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0278508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC CAAACCTGTT CCCGCGCCCT CTCCGGGTGC TTGAATCCAT GTCCAAAGCC 
CGCTTCGACA CGCTGGCCCT GCATGCCGGC GCCGCGCCCG ACCCGGCTAC CGGCGCGCGC
GCCACGCCGA TTCACCTGAG TACGTCCTTT GTGTTCCGCG ACAGCGAACA TGCGGCGTCA
TTGTTCAATA TGGAACGCGC GGGCCACGTG TATTCGCGCA TCTCCAACCC GACCGTCGCC
GTTTTCGAGG AGCGCATGGC CGCGCTGGAA AACGGCGTAG GCGCCATCGC CACGGCTTCG
GGCCAGGCGG CGCTGCATCT GGCCATCGTC ACGCTGATGG GCGCCGGCTC GCATATCGTC
GCGTCTTCGG CGCTGTATGG CGGCTCGCAC AACTTGCTGC ACTACACGCT GCGCCGCTTC
GGTATCGAGA CAACCTTCGT CAAACCCGGC GACATTGATG GCTGGCGCGC TGCCATCCGC
CCGAACACAC GGCTGCTGTT TGGCGAGACA CTCGGCAACC CGGGGCTGGA CGTGCTCGAC
ATCCCGACCA TTGCATCGAT TGCGCATGAT GCGGGCGTGC CCCTGCTGGT CGACTCGACC
TTCACCACGC CTTGGCTGCT GCAGCCGTTC GCGCATGGCG CAGATCTCGT CTATCACTCG
GCCACCAAGT TCCTGGGCGG GCATGGCACG ACCATCGGCG GCGTGCTTGT CGACGGGGGC
ACATTCGACT ACGTCGCCGC CGGTAAGCAC CCCGAACTGA CCGAGCCGTA CGCTGGCTTC
CACGACATGG TGTTTGCAGA GGAAAGCACC GTCGCACCGT TCCTGCTGCG CGCGCGCCGC
GAAGGCCTGC GCGACTTCGG TGCGTGCATG AACCCGATGG CCGCGTGGCA ACTGCTGCAA
GGCATCGAGA CCCTGCCGCT ACGCATGGCC CGACATGTGG ACAACGCCCG CCGCATCGTC
GCCTTCCTGG CAAGTCATCC GATGGTGGCA TCGGTCGCCT ACCCGGAGCT GGAATCGCAC
CCCGATCACA CGCTAGCCAA GCGCCTGCTG CCGCGGGGCT GCGGTGCAGT GTTCAGTTTT
GATCTGCGCG GCGACCGGCG TGCCGGCCAG CAGTTCATCG AATCGCTCGG CCTGTTCTCG
CACCTTGCCA ACGTGGGCGA TGCGCGCTCG CTGGTCATCC ACCCCGCATC GACGACGCAC
TTCCGTATGG ACGCCGACGC GCTGGCCGCG GCCGGCATCA GCGAAGGCAC GATCCGCCTG
TCCATCGGGC TGGAAGACGC AGACGACCTG ATCGACGATC TCAAGCGCGG CCTGAAAGCC
GCAGAGCGCG CGATGTCCGC CGCGCCCGGC AAAGCGGACG CCAACGCAAC GGGGGCCCGC
TGA
 
Protein sequence
MPRPNLFPRP LRVLESMSKA RFDTLALHAG AAPDPATGAR ATPIHLSTSF VFRDSEHAAS 
LFNMERAGHV YSRISNPTVA VFEERMAALE NGVGAIATAS GQAALHLAIV TLMGAGSHIV
ASSALYGGSH NLLHYTLRRF GIETTFVKPG DIDGWRAAIR PNTRLLFGET LGNPGLDVLD
IPTIASIAHD AGVPLLVDST FTTPWLLQPF AHGADLVYHS ATKFLGGHGT TIGGVLVDGG
TFDYVAAGKH PELTEPYAGF HDMVFAEEST VAPFLLRARR EGLRDFGACM NPMAAWQLLQ
GIETLPLRMA RHVDNARRIV AFLASHPMVA SVAYPELESH PDHTLAKRLL PRGCGAVFSF
DLRGDRRAGQ QFIESLGLFS HLANVGDARS LVIHPASTTH FRMDADALAA AGISEGTIRL
SIGLEDADDL IDDLKRGLKA AERAMSAAPG KADANATGAR