Gene Rpic12D_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1658 
Symbol 
ID8019310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1762093 
End bp1762506 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID644830439 
ProductPeptidylprolyl isomerase 
Protein accessionYP_002981613 
Protein GI241663253 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0122664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TTTCCCCGCT GCTGTGTGCT TCGTTGCTTG CCCTGGCTGC CGTTAGCGCG 
CAAGCCGCAT CGCCGGCTTC CGAGACGCTG CCCTCCGGTG TGATCGTCCA GACGCTGACC
AAGGGCACCG GCCCGTCGCC CAAGGCCAGC GACACGGTCA AGGTGCACTA CCGCGGCACC
CTGAGTGACG GCAAAGAATT CGACAGCTCC TACAAGCGCG GCCAGCCGAT CTCCTTCCCG
CTGAATCGCG TGATTCCCTG CTGGACCGAA GGCGTGCAGA AAATGCAGGT GGGCGGTAAG
GCGAAGCTGA CGTGCCCGGC GGCCAGCGCT TACGGCGAGC GCGGCGTTCC CGGCACCATT
CCGCCCAATT CGACGCTGAA CTTCGAGGTC GAACTGCTCG GTATCGGCGG CTGA
 
Protein sequence
MKHVSPLLCA SLLALAAVSA QAASPASETL PSGVIVQTLT KGTGPSPKAS DTVKVHYRGT 
LSDGKEFDSS YKRGQPISFP LNRVIPCWTE GVQKMQVGGK AKLTCPAASA YGERGVPGTI
PPNSTLNFEV ELLGIGG