Gene Rpic12D_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1651 
Symbol 
ID8019303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1755285 
End bp1756064 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID644830432 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002981606 
Protein GI241663246 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.787332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0473698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAG GAAAAACCGC CCTCGTCACG GGCTCGACCA GCGGGATTGG TCTGGGTATT 
GCCTGTTCGC TGGCCGCGCA GGGCGCCAAC ATCATCATGA ATGGCTTTGG CGATGTGGAA
GCACCCAAGG CGCAGATCGC GGCCGCGGGC AAAAATGCCA TCCGCATCGG ATATCACGGC
GCCGACATGA GCAAGCCAGC CGAGATCGAA GCGATGTTCG CCTATGCCGA CGCAGAGTTT
GGCGGCGTGG ACATCCTCGT CAACAACGCC GGCATCCAGT ATGTGGCCAA TGTCGAGGAT
TTCCCGACCG AACGCTGGGA CGCCATCATC GCCATCAACC TCACCTCGGC TTTCCACACG
ACGCGGCTTG CTGTGCCGGG CATGAAGCGC AAGAACTGGG GCCGCATCAT CAACGTCGCA
TCGGTGCATG GGTTGGTGGC ATCGGCGCAG AAATCGGCGT ACGTGGCGGC CAAACACGGT
ATCGTCGGCT TCACCAAATC GGTGGCGCTG GAGACCGCAC AGACGGGCAT CACGTCCAAC
GCGATCTGCC CGGGCTGGGT GCTGACGCCG CTCGTGCAGA AGCAGATCGA TGCGCGCGCC
GAGAAGGACG GCCTGTCCGC GCTCGAAGCC AAGACAGATC TGCTGATGGA AAAGCAGCCT
TCGCGTGAGT TCGTTACGCC CGATCAACTC GGCGCGCTGG CAGTCTTCCT GTGCAGCGAT
GCGGCTGAGC AGGTGCGCGG CGTGGCGTGG AACATGGATG GCGGCTGGGT CGCGCAGTAA
 
Protein sequence
MLQGKTALVT GSTSGIGLGI ACSLAAQGAN IIMNGFGDVE APKAQIAAAG KNAIRIGYHG 
ADMSKPAEIE AMFAYADAEF GGVDILVNNA GIQYVANVED FPTERWDAII AINLTSAFHT
TRLAVPGMKR KNWGRIINVA SVHGLVASAQ KSAYVAAKHG IVGFTKSVAL ETAQTGITSN
AICPGWVLTP LVQKQIDARA EKDGLSALEA KTDLLMEKQP SREFVTPDQL GALAVFLCSD
AAEQVRGVAW NMDGGWVAQ