| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1648 |
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| Symbol | |
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| ID | 8019300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1751606 |
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| End bp | 1753831 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830429 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002981603 |
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| Protein GI | 241663243 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0787569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACA AGACCGAACG GCCGGCCGAG GGGTCCGGAT CGACGGCAGA GCAGGTCGCT
CGGGCGATCG AATACCTCGT GGCGAATGCC GCAGACAGCG TCACGCTGAC CGGCGAGCCG
CTGGAGTCGC ACGCGCGCGG CACGGTCGCC ATCCTTGAAG GGCTGCGCGT CGATACGCCG
TCGTTGCAGG CGGCCGCGCT GTTTCTGTTG CCGACGCTGG CAATGGACAA CGAAAAAGCG
CTTGAGCCCG CGTTCGGGGC CGAGGTCGTC AAGCTCGTGC ACGATGTGCG GCAACTGCTG
CGCATTGGGG CCATTGCCGG CCTCGTCAGT CCGACCGATG CCAGCATCAC GCGCAAGAAC
GAAGCCGAGG CGCGCCGCGC GCAAGTCGAG GCGTTGCGCA AGATGTTGCT CGCGTTCGCG
CAGGACATTC GCGTCGTGCT GATCCGGCTG GCGTCGCGGT TGCAGTCGCT GCGCTGGTTG
GCGCAGACGA AGCGCTCGGC GCCGGAGGGC ATGGCGCGCG AGACGCTGGA TATCTATGCG
CCGCTCGCTA ACCGGTTGGG CATCTGGCAA CTGAAGTGGG AGCTTGAAGA CCTCGGTTTC
CGCTTCGAGG ATCCCGATAC CTACAAGCGC ATCGCGCGCC TGCTGGATGA AAAGCGCATC
GAGCGCGAGA AGTTCATCGG CCAGGCCATC GAGCAACTCC AAAAGACCTT GCACGACGCC
GGCATCCAGG CGGAGGTGAG CGGCCGGCCT AAGCACATCT ACAGCATCTG GAAAAAGATG
CGCGGCAAGG AGCTCGACTT TGCCGATCTG TACGACGTGC GCGCCTTTCG CGTCATCGTC
GACGACATCA AGGATTGCTA CACGGTGCTC GGTTTCGTGC ACCACATGTG GCAACCGATC
CCGAAGGAAT TCGACGACTA CATCTCGCGT CCGAAGGCCA ATGGCTACAT GTCGCTGCAC
ACGGTGGTGA TCGGCGACGA CGGCCGCGCG CTCGAGGTGC AGATCCGCAC ACGTGAAATG
CACCACTTTG CCGAGTACGG CGTGGCGGCG CACTGGCGCT ACAAGGAGGC GGGCAACAAG
GGCTACGCCG GCCAGTTCTC CGCCAGCGAG CGCTACGACG AGAAGATCGC CTGGCTGCGC
CAACTGCTCG CCTGGAAGGA CGATGCCGAG CACACCGTCG CGCACGAGGA TTCGCCTTGG
GAGCAACTCA AGCACACCGA GCTGGATGAC CACATTTACG TGCTGACGCC GCAGGCGCGC
GTGATCGCCT TGCCGCAAGG CGCGACGCCG GTCGACTTCG CTTACTACCT GCACAGTGAT
CTTGGCCACC GTTGCCGCGG CGCGCGCGTA GACGGCACGA TGGTGCCGCT GAACACACCG
CTCAGGAACG GCCAGACTGT CGAGATCGTC ACCGTCAAGC AGGGTGGCCC GTCGCGCGAT
TGGCTCAACA CCGAGTTGCA CTATCTCGTC AGCCCGCGAG CACGCACGAA GGTGCGCGCG
TGGTTCAATG CGATGGAGCT GGAAGAGACG CTCGCGCAAG GCCGTGCGCT CATCGACAAG
ACATTGCAGC GCGAAGGAAA GACCGCCGTC AACCTTGAAG AGCTGGCCGC GAAGCTCGGC
TACAAGACGT CGGAAGATCT TTACGCCGTG GTCGCCAAGG ACGAGCTGAG CCTGCGTCGC
ATCGAGGCTG TATTGCGTTC GGATGGGGCG TCGCCGCCTG TGCCCATCGA CGACGAGGCC
GCCATCACCA AGAAGAGCCG CGCCACCAGC GTGGCCCGTG GCGCGAAGAG CGGCGTATTG
GTGGTGGGCG TCGATTCGCT GCTCACGCAG ATGTCGCGCT GCTGCAAGCC GGCGCCACCG
GACGCCATCG TCGGCTTTGT CACGCGTGGC CGCGGCGTCT CGATCCACCG TCAGAGTTGC
GCGACGTTCC AGCAACTGGC CGCCCGCGCG CCGGGGCGCG TGATCCAGAC TGAGTGGGGC
CAACGCAGCG ATTCGGTCTA TCCGATCGAT ATCCAGGTCG AGGCGCTGGA CCGGCAGGGC
TTGTTGCGCG ACATCTCGGA AATCCTCTCG CGCGAAAAGA TCAATGTGAC CGGCGTGCGT
ACGCTGTCGA GCAAGGGCGT CGCAAAGATG CAGTTCACTG CGGAGGTGTC AGAGGCGACG
CAACTGCAAC GCGCGCTGAC TTTGATCGAA GAAGTGCAAG GGGTATTGAC AGCCCGAAGG
AAGTGA
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| Protein sequence | MENKTERPAE GSGSTAEQVA RAIEYLVANA ADSVTLTGEP LESHARGTVA ILEGLRVDTP
SLQAAALFLL PTLAMDNEKA LEPAFGAEVV KLVHDVRQLL RIGAIAGLVS PTDASITRKN
EAEARRAQVE ALRKMLLAFA QDIRVVLIRL ASRLQSLRWL AQTKRSAPEG MARETLDIYA
PLANRLGIWQ LKWELEDLGF RFEDPDTYKR IARLLDEKRI EREKFIGQAI EQLQKTLHDA
GIQAEVSGRP KHIYSIWKKM RGKELDFADL YDVRAFRVIV DDIKDCYTVL GFVHHMWQPI
PKEFDDYISR PKANGYMSLH TVVIGDDGRA LEVQIRTREM HHFAEYGVAA HWRYKEAGNK
GYAGQFSASE RYDEKIAWLR QLLAWKDDAE HTVAHEDSPW EQLKHTELDD HIYVLTPQAR
VIALPQGATP VDFAYYLHSD LGHRCRGARV DGTMVPLNTP LRNGQTVEIV TVKQGGPSRD
WLNTELHYLV SPRARTKVRA WFNAMELEET LAQGRALIDK TLQREGKTAV NLEELAAKLG
YKTSEDLYAV VAKDELSLRR IEAVLRSDGA SPPVPIDDEA AITKKSRATS VARGAKSGVL
VVGVDSLLTQ MSRCCKPAPP DAIVGFVTRG RGVSIHRQSC ATFQQLAARA PGRVIQTEWG
QRSDSVYPID IQVEALDRQG LLRDISEILS REKINVTGVR TLSSKGVAKM QFTAEVSEAT
QLQRALTLIE EVQGVLTARR K
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