| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1632 |
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| Symbol | |
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| ID | 8019282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1735100 |
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| End bp | 1735852 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830412 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
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| Protein accession | YP_002981588 |
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| Protein GI | 241663228 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.354695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.291784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAG CCAGAGTGAT ATTGCCGGAC GGCCGGATAC GGGAAACCGT GTTTTCCTCC
GCCGCGGAAC CCGCAAATTC ATGGCACTGG CTGCCGCCGG TCGAAGGCAC GGTCGTCGGG
ACCTTGCTCA ACTACCGCGG AGAACTCGAT GCGTTGGGTG ACGCGCTGTC TGCGCCGCCT
TACCAGGCAC CGCCCAAGGC GCCCATTCTG TATCTCAAGC CCGCCAACAC CCGTATCGGC
CATGGTCATG ATGTTGTGCT GCCGGCAGAT GTCGATGGCG TGTGGGCGGG TGCTTGCCTG
GGCGTGGTGA TTGGGCGGAC CGCCACGCGC GTGCCTGCGC GGCGCGCTGC AGATTTCATC
GCCGGCTACA CCATCGTCAA CGACCTGACC GTGCCGCATG CGAATTACTA CCGGCCTGCG
ATCCGCCACA AGTGCCGCGA TGGTTTTTGC CCGATGGGAC CATGGATGGT TGACCGCGAC
GATGTGTCAG ACGCCAATGC GCTGGATATT TCCGTGCGCA TCAATGGCGA GATCAAGCAA
CGCACCAACA CATCGACGCT GGTGCGGCCC ATCGCGCAAC TGCTCGCCGA CGTGACGGCC
TTCATGACGC TCGAAGCGGG CGACGTGCTG CTCGTTGGCA TGCCGGAGCA TCCGCCGCTG
GCGCGGGCCG GGGATTGCAT CGATATCGAC ATCGCCCACA TTGGCACGCT CACGACAGCA
CTGATCCGCC ACGCACAGGA GGCCTCGCGA TGA
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| Protein sequence | MRRARVILPD GRIRETVFSS AAEPANSWHW LPPVEGTVVG TLLNYRGELD ALGDALSAPP
YQAPPKAPIL YLKPANTRIG HGHDVVLPAD VDGVWAGACL GVVIGRTATR VPARRAADFI
AGYTIVNDLT VPHANYYRPA IRHKCRDGFC PMGPWMVDRD DVSDANALDI SVRINGEIKQ
RTNTSTLVRP IAQLLADVTA FMTLEAGDVL LVGMPEHPPL ARAGDCIDID IAHIGTLTTA
LIRHAQEASR
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