| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1630 |
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| Symbol | |
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| ID | 8019280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1732855 |
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| End bp | 1734336 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830410 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_002981586 |
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| Protein GI | 241663226 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.611975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.330509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG TCAACATGGA CCCAGTCAAG CATTGGATCG ACGGCCGCCA GGTCGACAGC
GCCGAGCGTT TCGTCACGAC CAATCCGGCC ACGGGCGAGG CCATTACCGA AGTGGCATCG
GGCGGTGAGG CGGAGATCAA CGCGGCGGTA GCGGCGGCCA AGGCGGCATT TCCGGCCTGG
GCCAACACGC CGGCCAAGCA GCGCGCCAAG CTGATGCGCC GACTCGGCGA GCTGATTGAG
CAGAACGTGC CGCACCTGGC GGCGCTGGAG ACGATGGATA CTGGCCTGCC GATCGCGCAG
ACGAGCAAGC AGCTCATTCC GCGCGCTTCC GAGAACTTCC ATTTCTTCGC CGCGGTGTGC
ACGCAGGTCA ACGGCCGCAC GTATCCGGTC GATGACCAGA TGCTCAACTA CACGCTGTAT
CAGCCGGTGG GCGTTTGCGC GTTGATCTCG CCGTGGAACG TGCCATTCAT GACCGCCACC
TGGAAGGTCG CTCCGTGCCT GGCGCTGGGT AATACGGCCG TGCTGAAGAT GTCGGAACTG
TCGCCGCTGA CAGCGGATCA ACTGGGCCGC CTGGCCCTGG AAGCCGGCAT TCCGCCCGGT
GTGCTCAACG TGGTGCAAGG CTATGGCGCC ACGGCCGGCG ATGCGCTGGT GCGCCATCCG
GATGTGCGGG TGGTGTCGTT CACCGGCGGC ACGACGACCG GCAAGCGCAT CATGGAGCGC
GCCGGCCTGA AGAAATTCTC GATGGAGCTA GGCGGCAAGT CGCCGGTGCT GGTCTTCGAC
GATGCGGACC TGGATCGCGC GCTCGATGCG TCACTGTTCA CCATTTTCTC CATCAACGGC
GAACGCTGCA CGGCGGGCTC GCGCATCTTC GTGCAAGAAA GTGTCTATGA CGATTTCGTA
CGCAAGTTTG CCGAACGTGC CAAGCGGCTT GTGGTGGGCG ACCCGGCAGA TGAGACAACC
CATGTCGGCT CGATGATCAC GCGCGCGCAT TGGGAGAAGG TCACGGGCTA CATCCGTCTC
GGCGAACAGG AGGGCGCGAA GATTCTGGCT GGCGGCGCGG AGAAGCCCGC TGGCCTGCCC
GGCCACCTGC AGAACGGCAA CTTCGTGGCG CCCACGGTGC TGGCCAATGT CGACAACCGC
ATGCGGGTGG CGCAGGAAGA AATCTTTGGC CCCGTGGCTT GCCTCATCCC GTTCAAGGAT
GAGGCCGATG GCCTGAAACT GGCCAATGAC GTGGAATACG GTCTGGCCTC GTACATCTGG
ACGCAGGATG TGGGCAAGGT GCACCGTGTG GCGCGTGGGA TCGAAGCCGG CATGGTCTTC
GTCAATAGCC AGAACGTGCG CGACCTGCGG CAGCCTTTCG GCGGTGTCAA AGCGTCCGGT
ACCGGGCGTG AGGGTGGCGA GTACAGTCTC GAGGTGTTTG CCGAAATCAA AAATGTCTGT
ATCTCGATGG GCAGCCACCA TATCCCGCGC TGGGGCGTTT GA
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| Protein sequence | MSRVNMDPVK HWIDGRQVDS AERFVTTNPA TGEAITEVAS GGEAEINAAV AAAKAAFPAW
ANTPAKQRAK LMRRLGELIE QNVPHLAALE TMDTGLPIAQ TSKQLIPRAS ENFHFFAAVC
TQVNGRTYPV DDQMLNYTLY QPVGVCALIS PWNVPFMTAT WKVAPCLALG NTAVLKMSEL
SPLTADQLGR LALEAGIPPG VLNVVQGYGA TAGDALVRHP DVRVVSFTGG TTTGKRIMER
AGLKKFSMEL GGKSPVLVFD DADLDRALDA SLFTIFSING ERCTAGSRIF VQESVYDDFV
RKFAERAKRL VVGDPADETT HVGSMITRAH WEKVTGYIRL GEQEGAKILA GGAEKPAGLP
GHLQNGNFVA PTVLANVDNR MRVAQEEIFG PVACLIPFKD EADGLKLAND VEYGLASYIW
TQDVGKVHRV ARGIEAGMVF VNSQNVRDLR QPFGGVKASG TGREGGEYSL EVFAEIKNVC
ISMGSHHIPR WGV
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