Gene Rpic12D_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1625 
Symbol 
ID8019275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1729429 
End bp1729893 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID644830405 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002981581 
Protein GI241663221 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID[TIGR02337] homoprotocatechuate degradation operon regulator, HpaR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCG CCTTCAAGCA CCGCAATCTG CCGCATCTGC TGCTGCGCGC GCGTGAGACC 
TTCATGGCGC GTTTTCGCCC GATCCTGCGC GAGCGCGGCA TCACCGAGCA GCAATGGCGC
GTGCTGCGTA CGCTCAACGA TACCGGCGAC ATGGAGCCCA ACCAACTCGC CGATGCATGC
CTGATCCTGA GCCCAAGCCT GACGCGCATG CTGGCGGCAA TGGAGCAGTC CGAGATGATC
GTGCGTACGA AGTCATCGGT GGATCAGCGC CGCCAGGTGA TTTCGCTCAC ACCCAAAAGC
CGCCAGTTCC TGGCCGACGT TGAACCGCAG GTGGATGCGG AATACGCGCG CATCGAAGCA
CAGTTGGGCC GCGCGCGGCT GGACGCGCTC TACGCAGCCA TTGATGAGTC GATCCAGGTC
ATGGAAACGC ACACGCCCAT GGGCCGCTTC ATCGGCGACG AGTAA
 
Protein sequence
MASAFKHRNL PHLLLRARET FMARFRPILR ERGITEQQWR VLRTLNDTGD MEPNQLADAC 
LILSPSLTRM LAAMEQSEMI VRTKSSVDQR RQVISLTPKS RQFLADVEPQ VDAEYARIEA
QLGRARLDAL YAAIDESIQV METHTPMGRF IGDE