| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1623 |
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| Symbol | |
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| ID | 8019273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1726342 |
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| End bp | 1728456 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830403 |
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| Product | Oligopeptidase A |
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| Protein accession | YP_002981579 |
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| Protein GI | 241663219 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.932062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TTTCGCCCAA GGTTGCCACT CCGGCCAACA ATCCGTTGCT CGATTTTTCC
GGTCTGCCGC GCTTTGCGGA CATCCGCCCC GAACACATCT CGCCGGCCGT CGACGTGCTG
CTCGAGCGCG CCGCATCGGC GGTGGCGCAG GTCAAGGACC CGGCCGCGCC CGTGAGCTGG
AACACCGTCG TCACCGCACT CGAAGACGCC ACCGAACCGC TGGGCCGCGC CTGGGGCATC
GTCAGCCACC TGAGCGCCGT CGCCGACACG CCCGATCTGC GCGAAGCGCA TGCCGCCAAT
CTGCCCCGCG TGACCGAATT CTGGTCGGGC CTCGGTCAGG ATCTGGAACT ATTCGAAAAG
TACAAGGCGA TTGCCGACAG CGCGGAATAC GCCACGCTGT CGCCCGCGCG CAAGAGGCTG
CTTGAAAACG AACTGCGCGG TTTCCGCCTG GGCGGTGCAG AACTGCCCGA AGACCAGAAG
CCGCGCTTTG CCGCCATCCA AGAGCAGCAG GCGCAACTGA CCAAGGCCTT CAGCGACCAC
GTCCTGGATG CGACCAACGC CTACGCACTA GTCATCGACG ACGAAGCGCG CCTCGCCGGC
CTGCCAGACG ACGCCAAGCA GGCTGCACAG GAAGCGGCAC GCCGCGACAA TCCCGAGGCG
ACCGGCTGGA AGTTCTCGCT GCACTTCCCG TCGTATTTCC CGGTGCTGCA ATACGCGGAT
GACCGCGCGC TGCGCCGCAC GCTGTACGAA GCCAACGTCA CGCGTGCGTC CGAACTGGGC
GCGCAGTACG GCGGCGGCAA GGCCGAGTGG GACAACACCG CCAACATGGC CGAGCAGCTC
ACGCTGCGCA CCGAAGAAGC GCACATGCTG GGCTATCGCA ATTTCGGCGA AGTGTCGCTG
GTGCCGAAGA TGGCCGACTC GCCCGAAGAC GTGCTGCGCT TCCTGGAGGA GCTGGCTGAC
CGCGCCCGTC CGTTCGCCGA GAAGGACTGG GAAGAGTTGC AGGCGTTCGC CAAGACCACG
CTCGGCATCG ACAAACTCGA ACCGTGGGAC ATGGCCTACG CGTCGGAAAA GCTGCGCGAA
GCGCGCTACG CGTTTTCCGA GCAGGAGGTG AAGCAGTACT TCCCGGAACC TGCCGTGCTG
GATGGCTTGT TCAACGTCGT GCAGACGCTG TTCTCGGTGA AGATCCTGCC GGAGGCGGCC
GAGGTATGGC ACCCGGACGT CCGCTTCTTC CGCGTCGAAT CTGCCCAGGG CGAATTGCTC
GCACAGTTCT ACATCGACCT GTATGCGCGC GAAGGCAAGC GTGGGGGTGC ATGGATGGAC
GATGCACGCG GGCGCAAGCT GCTGGGCGAT GCGGGTGTGC AAACCCCCGT GGCTTACCTC
ACCTGCAACT TCTCCGGCCC GGTCGGCAAC AAGCCCGCGC TGTTCACCCA CGACGAGGTC
ATCACGCTCT TCCACGAGTT CGGCCACGGC CTGCACCACA TGCTCACGCA GGTGGATGAG
CTGGGCGTAT CGGGCATCAA TGGCGTTGAA TGGGATGCGG TAGAGCTGCC GTCGCAGTTC
ATGGAGAACT TCTGCTGGGA ATGGGAAGTG CTCTCGCGCA TGACCCGCCA CGTGAATTCC
GGCGAACCGC TGCCTCGCAA GCTGTACGAC AGCATGCTGG CCGCGAAGAA CTTCCAGAAC
GGCATGGCGA CGCTGCGCCA GATCGTGTTC TCGACGTTCG ACATGCACCT GCACACGGAC
TTCGACCCGA AGGGCGCGAC GTCGGTACTG GAGCTGTCGC GCCAGATCAA CAATCGCTTC
CACGTGGTGC CCCAGGCCGA GTTGTCGCGC TGGCCGAACA CGTTCAGCCA CATCTTTGCG
GGCGGCTATG CGGCGGGCTA CTACAGCTAC AAGTGGGCCG AGGTGCTGTC GGCAGATGCC
TATGCCGCGT TCGAGGAGGC CAGCAAGCTG GGCGGCTCGG TGCTCGATGC AGAAACCGGC
GCGCGCTATC GCCGTGAAGT GCTGGCCGTG GGCGGCAGCC GCCCGGCCAT CGAATCGTTC
ACGGCTTTCC GAGGCCGTGC GCCCAGCATC GATGCACTGC TGCGCCATGG CGGCATGGTT
GCGGAAGCCG CGTAA
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| Protein sequence | MTDISPKVAT PANNPLLDFS GLPRFADIRP EHISPAVDVL LERAASAVAQ VKDPAAPVSW
NTVVTALEDA TEPLGRAWGI VSHLSAVADT PDLREAHAAN LPRVTEFWSG LGQDLELFEK
YKAIADSAEY ATLSPARKRL LENELRGFRL GGAELPEDQK PRFAAIQEQQ AQLTKAFSDH
VLDATNAYAL VIDDEARLAG LPDDAKQAAQ EAARRDNPEA TGWKFSLHFP SYFPVLQYAD
DRALRRTLYE ANVTRASELG AQYGGGKAEW DNTANMAEQL TLRTEEAHML GYRNFGEVSL
VPKMADSPED VLRFLEELAD RARPFAEKDW EELQAFAKTT LGIDKLEPWD MAYASEKLRE
ARYAFSEQEV KQYFPEPAVL DGLFNVVQTL FSVKILPEAA EVWHPDVRFF RVESAQGELL
AQFYIDLYAR EGKRGGAWMD DARGRKLLGD AGVQTPVAYL TCNFSGPVGN KPALFTHDEV
ITLFHEFGHG LHHMLTQVDE LGVSGINGVE WDAVELPSQF MENFCWEWEV LSRMTRHVNS
GEPLPRKLYD SMLAAKNFQN GMATLRQIVF STFDMHLHTD FDPKGATSVL ELSRQINNRF
HVVPQAELSR WPNTFSHIFA GGYAAGYYSY KWAEVLSADA YAAFEEASKL GGSVLDAETG
ARYRREVLAV GGSRPAIESF TAFRGRAPSI DALLRHGGMV AEAA
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