Gene Rpic12D_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1622 
Symbol 
ID8019272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1725378 
End bp1726247 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID644830402 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_002981578 
Protein GI241663218 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.751139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.927999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC AACTCATTGA CGGCAACGCG CTTGCCAAAC AACTCCGCGC CGAGGCCGCA 
CAACGCGCAG CGGCCCTGAC CGCGCGCGGC CACCAGCCTG GCCTCGCCGT CATCCTCGTC
GGCGAAGATC CGGCCAGCCA GGTGTATGTG CGCAACAAGA TCAAGGCGTG CGAAGACAAC
GGCTTTCTGT CCAGCTTCGA CCGCTACCCG GCTGACTTGT CCGAAGCCGA CCTGCTCGGC
CGCATCGACG CGCTGAACCG CGACCCGCGC ATCCACGGCA TCCTGGTCCA GCTGCCGCTG
CCCAAGCACA TCGACAGCCA CAAGGTGCTC GAAGCCATCG CGCCCGAGAA AGACGTGGAC
GGTTTCCACG TGGCCAATGC CGGCGCCCTG ATGACGGGCG CCCCGCTGTT CCGCCCGTGC
ACGCCGTACG GCTGCATGAA GATGCTGGAA TCGATCAACT ACCCGGTGCG CGGCGCCAAT
GCGGTGGTGG TCGGCGCCTC GAACATCGTC GGCAAACCGA TGGCGATGCT GCTGCTGCAA
GCCGGCGCCA CCATCACGAT CTGCAACAGC AAAACGCGCG ATCTGGCCGC TCACACGCGC
GAGGCCGACA TCATCGTGGC CGCCGTGGGC CGCCGCAACA TCATCACCGC CGACATGGTC
AAGCCGGGCG CCGTCGTCAT CGATGTCGGC ATGAACCGCG ACGATGCCGG CAAGCTGTGC
GGCGACGTCG ACTTTGCCGG CGTCAAGGAA GTTGCCGGCT ATATCACGCC TGTTCCGGGC
GGTGTCGGCC CGATGACGAT CACCATGCTG CTGATCAACA CCCTGGAAGC CGCCGAGCGC
GCTGCTGAAG GAGCCGCCCT GGCGGCGTAA
 
Protein sequence
MTAQLIDGNA LAKQLRAEAA QRAAALTARG HQPGLAVILV GEDPASQVYV RNKIKACEDN 
GFLSSFDRYP ADLSEADLLG RIDALNRDPR IHGILVQLPL PKHIDSHKVL EAIAPEKDVD
GFHVANAGAL MTGAPLFRPC TPYGCMKMLE SINYPVRGAN AVVVGASNIV GKPMAMLLLQ
AGATITICNS KTRDLAAHTR EADIIVAAVG RRNIITADMV KPGAVVIDVG MNRDDAGKLC
GDVDFAGVKE VAGYITPVPG GVGPMTITML LINTLEAAER AAEGAALAA