| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1620 |
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| Symbol | |
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| ID | 8019270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1722078 |
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| End bp | 1724606 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830400 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002981576 |
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| Protein GI | 241663216 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.252508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCC CCTCCCACGC TTCGCAGGAA CCGGCCGCCA AATCCGAGCC GTCAACGCCT
GCCGCGCCTG CGCCCATTTC CGTGAATACG CCGGAGCTCC CTTCCGACGA AGCCGTGCGT
CCGAATGTGC CGCGCCGCCT TTGGCTGACG CGCCTGGGCC GCCTGTGGAC GACCAACTGG
TTCATGTTCA TTCCGCTGGT GGCGATCGTC CTGTTTGCCG GCGCGATGAT TTTCATCCTG
TATCAATTGC ACGCCACGGA GGTGCAGCAG CAGCGCGACG CCCTATACCG CGATGCCGCC
TGGGCCGAGC AGAAGGTTCG CCTGTCCCTG CAGAGCAACC AGGATCAGGT GGCCGCCCTG
GCACGCGACA TCGGTGCTGC GCAGCTTGAC CCGAGCGCGT ATCGCGATGC TGCCCGCCAG
CTTCTGCGTG AGAACCCGGA ACTGGTCTTC ATCAATTGGC TGGATGCCAC ACGCCGGCCG
CGCTGGGCGT TCCCGTCTAC CTCGGAATTC ACCGCGCGCG TGCGCGAAAC GCGCGACCAT
CCGCTCGAAC CCGAAATCCA ATCCGCCTAC GATGCCGCGC GTGAAACCCA GCGCGCCGTC
TACTCCCGCC CCATCCAGAA CGAGCGCGGC GAGAGCTTCA TGCTCATGGA AGTTCCGATC
GTGCGCGACA ACGAATTCCT CGGCACGGTC GGCGCCATGT ATTCGGTCAC GGGCATCCTC
ACGCAACTGC TGCCCGGCGA GCTGACCGAC CGCTACCGCT TCTCGCTGGT CGACAAGAAC
AACGTGGTCC GGGCCAGCAC GTCGTTGCGG CCAGTGCCCA AGACCGCCGC GTCTTACGAA
GTGCTGCTGG ATCCCCCGGG GCATTCGCTG TCGTTGCGGG CCGAGGCGTA TCCGGCGCCG
TCCAACCTGC CCAACAACAT GCTGATGTGG CTGGTGGCCG GCCTGTCGTG CTTCGTGATC
TGGAGCCTTT GGAGCGTGTG GCGGCACACC AGCCGCCGCT CCGAAGCGCA GCGCGCACTG
CTGGCGGAAA CGTCATTCCG CCGTGCCATG GAAAACTCCA TGGTGATCGG CATGCGCTCG
CTCGACCTCA ACGGCCGCAT CACCTACGTG AACCCCGCGT TCTGCCGCAT GATCGGCTGG
ACCGAAGCCG AGCTGGTGGG GCGCATGCCG CCGTTCCCGT ATTGGCCGCC AAACGAGATC
GGCGAGATGC AGAAGCACAT CGAGCTGACC CTGCGCGGCA AGGCGCCCGC CAACGGTATG
GAATTGCGCA TGATGCGCCG CGACGGCACG AGCTTCTATG CGCGGATGTA CGTTTCGCCG
CTGATCGACG CGCGCGGCCG GCACACCGGC TGGATGAGTT CCATCACGGA CATCACCGAA
CCCAAGCGCG CCCGCGAAGA CCTCGCCGCT GCGCACGACC GCTTCACCAC GGTGCTGGAG
AGCCTGGATG CGGCCGTGTC GGTACTCTCG ACCGACAAGG CCGAACTGCT GTTCGCCAAC
CGCTACTACC GCCAGCTCTT CGGCTGGGAA GCGTTCGGCC ATCTGCAGCT CTCCGGCAAC
GACGTCAACA CCGAAGACGT TTCCAGCGAT GCGCTCGACC TGGTGGATGC CTACGCCGGC
CTGCCGGCCT CCGAACTGAC GCCGCACGCC GCAGATGCAC GTGAAATCTA CGTGCCGTCG
ATGCAGAAAT GGTTCGAGGT GCGCCGCCGC TACATCCAGT GGGTGGACGG ACACCTTGCG
CAGATGCAGA TCGCCACCGA CATCACGGTG CGCAAGGCCG CTGAAGAAAT GACGCGCCAG
CACGAAGAAC GCCTGCAGTT CACCAGCCGC CTGACGACGA TGGGCGAGAT GGCCTCGTCG
CTGGCCCACG AGCTGAACCA ACCGCTGGCG GCCATCAACA ACTACTGCAT GGGTGCGGTG
GGCCGCCTGA AATCGGGGCG CAGCACGCCG GAAGAGCTGA TCCCTGTGCT GGAAAAGACC
TCCGCCCAGG CCGTACGTGC CGGCACCATC ATCCAGCGCA TCCGCGGTTT CGTGAAGCGC
AGCCAGCCGC AGCGGCGCGA GTCAGACCTG CGCGATATCG TGGCGGACGC GGTGGGCCTG
GCCGAACTGG AAGCCACCCG GCGCGGCATC ACCATCCTCA CGCGCCTGCC GGGCGATCTG
CCGCCCTTGT ATGTCGATCC GGTGCTGATC GAGCAGGTGC TCGTCAACTT GCTCAAGAAT
GCCGCCGAAG CCATGGCCGC CCACCCGCGC CTGCGCGCTG CCAGCGTCCT GCGGCTGCAC
GCCAACCTGA TCAACGATCC GGAAAATTCC GTGCTGATCG AGGTGATCGA CCAGGGCCCG
GGCGTGGACG ACAGCACCAA GGAGCGGCTG TTCGAGCCGT TCTTCAGTAC CAAATCCGAC
GGCATGGGCA TGGGGCTGAA CATCTGCCGC TCCATCATAG AATCCCACCT CGGCAGGCTC
TGGGTAGAAA ACAACGCCGA TGGCATCGGC TGTACGTTTA AAATCATCCT GCCGTTGAAT
CCGCTGTAG
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| Protein sequence | MLAPSHASQE PAAKSEPSTP AAPAPISVNT PELPSDEAVR PNVPRRLWLT RLGRLWTTNW
FMFIPLVAIV LFAGAMIFIL YQLHATEVQQ QRDALYRDAA WAEQKVRLSL QSNQDQVAAL
ARDIGAAQLD PSAYRDAARQ LLRENPELVF INWLDATRRP RWAFPSTSEF TARVRETRDH
PLEPEIQSAY DAARETQRAV YSRPIQNERG ESFMLMEVPI VRDNEFLGTV GAMYSVTGIL
TQLLPGELTD RYRFSLVDKN NVVRASTSLR PVPKTAASYE VLLDPPGHSL SLRAEAYPAP
SNLPNNMLMW LVAGLSCFVI WSLWSVWRHT SRRSEAQRAL LAETSFRRAM ENSMVIGMRS
LDLNGRITYV NPAFCRMIGW TEAELVGRMP PFPYWPPNEI GEMQKHIELT LRGKAPANGM
ELRMMRRDGT SFYARMYVSP LIDARGRHTG WMSSITDITE PKRAREDLAA AHDRFTTVLE
SLDAAVSVLS TDKAELLFAN RYYRQLFGWE AFGHLQLSGN DVNTEDVSSD ALDLVDAYAG
LPASELTPHA ADAREIYVPS MQKWFEVRRR YIQWVDGHLA QMQIATDITV RKAAEEMTRQ
HEERLQFTSR LTTMGEMASS LAHELNQPLA AINNYCMGAV GRLKSGRSTP EELIPVLEKT
SAQAVRAGTI IQRIRGFVKR SQPQRRESDL RDIVADAVGL AELEATRRGI TILTRLPGDL
PPLYVDPVLI EQVLVNLLKN AAEAMAAHPR LRAASVLRLH ANLINDPENS VLIEVIDQGP
GVDDSTKERL FEPFFSTKSD GMGMGLNICR SIIESHLGRL WVENNADGIG CTFKIILPLN
PL
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