| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1616 |
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| Symbol | |
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| ID | 8019266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1714671 |
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| End bp | 1716452 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830396 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002981572 |
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| Protein GI | 241663212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00163952 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGG TGGAAATCAA GGTGCCGGAC ATCGGCGACT ACAAGGACGT GGACGTCATT
GAAGTGATGG TGCAGGCGGG CGATGCCGTC ACCGTCGATC AGGCGCTGAT CACGCTGGAA
ACCGACAAGG CCACCATGGA CGTGCCGTCG GATGTGGCTG GCAAGATCGT CGAAGTCAAG
ATCAAGGTGG GCGATAAGGT CAGCCAAGGC ACGGTGATTG CCACGGCGGA AGCGGGCGCG
GCGGCGGCTC CGGCGCCTGC GCAAGCACCG GCTCCGGCCG CAACGCCCGC TGCTGCGCCG
GCCGCAACGG CCCCCGCACC GCAAGCGAGC AAGCATGCCG GCGGCGCTGA TATCGAATGC
GAGATGCTCG TCCTTGGCTC GGGCCCCGGC GGTTATTCGG CCGCCTTCCG CAGCGCGGAT
CTCGGCATGA GCACTGTGCT GGTGGAGCGC TTCTCCACGC TGGGCGGCGT TTGCCTGAAC
GTGGGCTGTA TCCCGTCGAA GGCGCTGCTG CACACCGCGG CTGTCATGGA GGAAGTGAAG
GCCATGGCCG CACACGGCAT TGTCTACAGC GAACCCACGG TTGATATCAA CCAGCTGCGC
AAGCACAAGG AGTCCGTGAT CGGCAAGCTG ACCGGCGGGC TGGCCGGCAT GGCCAAGGCA
CGCAAGGTGC AGGTCGTGCG TGGCGTCGGT GCGTTCCTGG ACCCGAACCA CCTCGAAGTG
CAACTGACGG ACGGCGACGG CAAGGCAACG ACGGGCGAGA AGAAAGTCAT CCGTTTTGCC
AAGGCGATCA TCGCTGCAGG CAGCGAAGCC GTGAAGCTGC CGTTCATTCC GGAAGATCCG
CGCATCGTCG ACTCGACGGG CGCGCTGGAA CTGCGCGAAG TGCCGGCCAA GATGCTGGTC
ATCGGCGGCG GCATCATCGG GCTGGAAATG GCCACGGTGT ATAGCACGCT CGGCGCCCGG
ATCGACGTGG TGGAAATGCT CGACGGCCTG ATGCAGGGCG CTGACCGCGA CCTCGTCAAG
GTGTGGGACA AGATGAACAA GGGCCGCTTC GACAAGGTCA TGCTCAAGAC CAAGACGGTC
GGGGTGGAAG CCAAGCCGGA CGGTATTTAC GTCAAGTTCG AGGGCGAAGC CGCACCAGCG
GAGCCGCAAC GCTATGACAT GGTGCTGGTG GCAGTGGGCC GCGCGCCGAA TGGCAAGCGC
ATCGGCGCAG AAAAGGCCGG CGTGGCAGTG ACGGACCGTG GCTTCATCGA CGTGGACAAG
CAGCAGCGCA CGAATGTGCC GCACATTTTC GCGATCGGCG ACATCGTCGG GCAGCCGATG
CTGGCACACA AGGCCGTGCA CGAAGGCCAT GTGGCGGCGG AAGCCGCGCA CGGCGAGAAG
GCATACTTCG ACGCCAAGCA GATTCCGTCG GTCGCCTATA CCGATCCAGA AGTGGCTTGG
GCAGGGCTGA CCGAAGAGCA ATGCAAGGCG CAGGGCATCA AGTACGGCAA GGGCGTGTTC
CCTTGGGCGG CTTCGGGCCG GGCTATCGCC AACGGCCGGG ATGAGGGTTT CACCAAGCTG
ATCTTCGACG AGGAAACCCA CCGCATCATC GGTGGCGGCA TTGTTGGCAC GCACGCGGGT
GACCTCATCG GCGAGGTTTG CCTGGCCATC GAGATGGGCG CGGACGCCGT GGATATCGGC
AAGACCATCC ACCCGCACCC GACGCTGGGT GAGTCGGTGG GCATGGCTGC TGAAATCTAC
GAAGGCGTTT GCACGGACGT GCCGCCTGCC CGCAAGCGTT GA
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| Protein sequence | MSVVEIKVPD IGDYKDVDVI EVMVQAGDAV TVDQALITLE TDKATMDVPS DVAGKIVEVK
IKVGDKVSQG TVIATAEAGA AAAPAPAQAP APAATPAAAP AATAPAPQAS KHAGGADIEC
EMLVLGSGPG GYSAAFRSAD LGMSTVLVER FSTLGGVCLN VGCIPSKALL HTAAVMEEVK
AMAAHGIVYS EPTVDINQLR KHKESVIGKL TGGLAGMAKA RKVQVVRGVG AFLDPNHLEV
QLTDGDGKAT TGEKKVIRFA KAIIAAGSEA VKLPFIPEDP RIVDSTGALE LREVPAKMLV
IGGGIIGLEM ATVYSTLGAR IDVVEMLDGL MQGADRDLVK VWDKMNKGRF DKVMLKTKTV
GVEAKPDGIY VKFEGEAAPA EPQRYDMVLV AVGRAPNGKR IGAEKAGVAV TDRGFIDVDK
QQRTNVPHIF AIGDIVGQPM LAHKAVHEGH VAAEAAHGEK AYFDAKQIPS VAYTDPEVAW
AGLTEEQCKA QGIKYGKGVF PWAASGRAIA NGRDEGFTKL IFDEETHRII GGGIVGTHAG
DLIGEVCLAI EMGADAVDIG KTIHPHPTLG ESVGMAAEIY EGVCTDVPPA RKR
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