Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1610 |
Symbol | |
ID | 8019260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1709582 |
End bp | 1710289 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830390 |
Product | nitroreductase |
Protein accession | YP_002981566 |
Protein GI | 241663206 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.367755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.918275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC GACGCCCCAC CTCCGCAGAA GTCGAGCTCG TCGATCAGGC AATCACTTCG CGCCGTTCCG TACGCGCGTT CCTGCCGACG CCGGTCGCTC GTGAAGACAT CGAAGCGATT CTGGATGTCG CACGCCGTGC GCCGTCAGGC AGCAACACGC AGCCGTGGAA ACTCTATGTG CTGACGGGTG AATCGAAAGC GCGCTTGTCC GAATCGGTGT TGGCGGCGTA CGACCACCCG GAGGCGGACA CGGTGCATCG CGAGGAGTAT CCGTACTACC CCCGCACATG GATCGATCCG TACCAGAGCC GCCGCCGCAA GGTCGGCTGG GATCTTTACG GCCTGCTGGG CATCGGCCGC ACCGACAAGG AGCGCATGCA CGCACAGCAT GCGCGCAACT TCCGATTCTT CGATGCGCCG GTCGGCATCA TCTTCACAAT CGACCGCGTG ATGGAGCAGG GCAGCTGGCT TGATTACGGC ATGTTTTTGG AAGCCGTGAT GGTGGCAGCG CGTGCTCGCG GCATCGATAC GTGTCCACAG GCCGCTTTCA CGCAGTTCCA TCGGATCATC GCCGAGCATC TGCGGCTGAC CGATGACGAG ATGGTCGTCT GCGGCATGTC GATGGGTTAC GCCAATCCGG GTGCCATCGA AAATACGCTC GTCACCGAGC GCGCACCTGT CTCCGAGTTC ACTCGCTTCC TGGATTGA
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Protein sequence | MTDRRPTSAE VELVDQAITS RRSVRAFLPT PVAREDIEAI LDVARRAPSG SNTQPWKLYV LTGESKARLS ESVLAAYDHP EADTVHREEY PYYPRTWIDP YQSRRRKVGW DLYGLLGIGR TDKERMHAQH ARNFRFFDAP VGIIFTIDRV MEQGSWLDYG MFLEAVMVAA RARGIDTCPQ AAFTQFHRII AEHLRLTDDE MVVCGMSMGY ANPGAIENTL VTERAPVSEF TRFLD
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