Gene Rpic12D_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1608 
Symbol 
ID8019258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1707089 
End bp1707886 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID644830388 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002981564 
Protein GI241663204 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0247666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.511449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CAGACAAGGA CCCCGGCAAG ACGTCTATCC AGGTCATCGA ACGCATGATG 
ATGCTGCTCG ACGCGCTTGC CGATCACGCC GATCCGGTCA GCCTGAAGGC GCTGTCGGCC
AGCACCGGCC TGCACCCGTC CACCGCGCAT CGCATCCTGA ACGACATGGT GGCTTGCCGC
TTCGTCGATC GCTCCGACCC GGGCAGCTAC CGTCTCGGCA TGCGTTTGCT GGAACTTGGC
AACCTGGTCA AGGCGCGCCT GTCGGTGCGA GAAGCGGCGC TCGCGCCGAT GCGCGCCCTG
CACCGACTGA CCGGCCAGAC CGTCAACCTC TCGGTGCGTC AGGGCGATGA GATCGTCTAC
ATCGAGCGCG CCTATTCCGA GCGCTCTGGC ATGCAAGTCG TGCGCGCCAT TGGCGGCCGC
GCGCCGCTGC ATCTGACTTC GGTTGGCAAG CTGTTCCTGG CTGCTGACGA ACTGGGCCGT
GTGCGCGCCT ATGCGACTCG CACGGGCTTG TCTGGCCACA CCCGCACCTC CATCACGGAT
TTGCCCAAGC TTGAACGCGA ACTCAACTGG GTGCGCACCA ACGGCTACGC GCGTGACAAC
GAAGAACTGG AACTCGGCGT GCGCTGTATC GCTGCCGGCA TCTATGATGA TTCGCGGCGT
CTGGTCGCGG GCTTGTCGCT ATCGGCACCG GCAGACCGGT TGCAGGACAG CTGGCTCGAC
AACCTCAAAG ACACTGCACT GCAAATCTCC AAAGGGATGG GCTACACGCA CGAGGACGAT
ACGGTGCGCG CAGAGTAA
 
Protein sequence
MAEADKDPGK TSIQVIERMM MLLDALADHA DPVSLKALSA STGLHPSTAH RILNDMVACR 
FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY
IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADELGR VRAYATRTGL SGHTRTSITD
LPKLERELNW VRTNGYARDN EELELGVRCI AAGIYDDSRR LVAGLSLSAP ADRLQDSWLD
NLKDTALQIS KGMGYTHEDD TVRAE