Gene Rpic12D_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1607 
Symbol 
ID8019257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1706123 
End bp1706848 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID644830387 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_002981563 
Protein GI241663203 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.096074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.366344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAG GTTTGTTCGT CACTTGCCTG ATTGATCTGA TGCGGCCCGA GATCGGGTTT 
TCAGTGCTCA AGCTGCTGGA AAAGGCCGGT TACGACGTCG TGGTGCCGCC CGCGCAGACC
TGCTGCGGGC AGCCCGCCTA CAACTCCGGC GATCGCCCTT TGGCCCGTGA CTTGGCCGAA
AAAGCGCTCA AGGAATTCGA GCAGTTCGAC TACGTCGTCG TCCCGTCCGG GTCGTGCGGC
GGCATGATCC GCAAGGGCTA CGCCGATTTG TTTCGCGATG ATCCGGAGCT CGCAGGCCGC
TATGAGCGCC TTGCGCCGCG TGTGTACGAA CTGACCGATT TTCTCGTCAA CGTGGCACGC
ATCGAAGCGC TCGACTCGGA GTTTCACGGC CACGTGACGT ACCACGATTC GTGCTCTGGT
CTGCGCGAGT TGGGCGTGAA AGCACAGCCG CGCGAGCTGC TCGGCAAGCT GCCGGGGGTG
CAGTTGACCG AGATGCCTGC ATGCGAGGCT TGCTGCGGTT TCGGCGGCAC GTTCTCGATC
AAGTACGGCG ATATCTCCAC CGCCATTGCA GATGAGAAAT GCGCCAACAT CAAGGCCAGC
GGCGCCGATG CGGTGGTGCT CGGCGACGTG GGCTGCATGC TCAACATCGA AGGCCGGCTG
CGCCGTACGG GTGACACGCA CACGCGCGTG CTGCACATCG CGCAAGTCCT CGCCGGCGAC
GCGTAA
 
Protein sequence
MRVGLFVTCL IDLMRPEIGF SVLKLLEKAG YDVVVPPAQT CCGQPAYNSG DRPLARDLAE 
KALKEFEQFD YVVVPSGSCG GMIRKGYADL FRDDPELAGR YERLAPRVYE LTDFLVNVAR
IEALDSEFHG HVTYHDSCSG LRELGVKAQP RELLGKLPGV QLTEMPACEA CCGFGGTFSI
KYGDISTAIA DEKCANIKAS GADAVVLGDV GCMLNIEGRL RRTGDTHTRV LHIAQVLAGD
A