Gene Rpic12D_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1598 
Symbol 
ID8019246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1697528 
End bp1699429 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content62% 
IMG OID644830376 
ProductK potassium transporter 
Protein accessionYP_002981554 
Protein GI241663194 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.364539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.357667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CTCTAACAGC AACCGGGTCG CCCCAGACCA ACGTGAACCT GCGCGCCATG 
GTGATCGGCG CCGTGGGTGT AGTGTTCGGA GACATCGGCA CCAGCCCGCT GTATTCGCTC
AAGGAATGCT TCAGCCCCGA TCACGGCATT CCGTTCTCCA GTGCCGCGGT GCTCGGCATC
ATCTCCATGC TGTTCTGGGC GATGGTGATC GTGGTGTCGC TCAAGTATGT GCTGTTCGTC
ATGCGCGCCG ACAACAACGG CGAGGGCGGC ATCCTCGCGC TGATGGCGCT GTCGCTGCGT
ACGGCCAATA CCGATTCCCG GCGCATGTCG CTGCTGATGA TGCTGGGCGT CTTCGGCGCG
TGCATGTTCT ACGGCGACGC CGTGATCACG CCCGCCATCT CCGTCCTGTC GGCCATGGAA
GGCCTGGAGA TCGCCGCGCC CGCGCTGTCG CCCTTTGTGC TGCCGATCAC GATCGTGATC
CTGGCGGCGC TGTTCCTGAT TCAGCGCAGC GGCACGTCGG TCGTCGGCAA GCTGTTCGGT
CCGGTGATGC TGCTGTGGTT TGCCGCGCTA GCCGCGCTGG GCATGATGAA TCTGGTGAAG
GCGCCGCAGA TTCTGGTGGC CGTCAACCCG ATGTATGCGA TTTCGTTCCT GCACGACCAT
GCGCTGCAGG CGTTCATCGT GCTGGGTTCG GTGTTTCTGG TGCTGACCGG CGCTGAAGCG
CTGTACGCCG ACATGGGCCA CTTCGGCGCT CGGCCCATCC GCTGGGCGTG GTTCTTCATC
GTCGCGCCGA GCTTGTTGGT GAACTACTTC GGCCAAGGCG CCATGCTGCT GACCGACCCA
AGCACCATCG AAAACCCGTT TTACCGTTCC GTGCCGGAAG CGCTGCAACT CCCGATGGTG
GTGCTTGCGG CGGCGGCTAC GGTCATTGCC TCGCAGGCCG TGATTTCGGG AGCGTTCTCG
CTGACGAGTC AGGCGATTCA ACTGGGCTTT GTGCCCCGCA TGCGCATTCG CTACACGTCG
GAAGCAGAAA TTGGCCAGAT CTACGTGCCG ATGGTCAACT GGATGCTCCT GATCCTGGTG
GTGAGCGTGG TGCTGGCGTT CAAGAAGTCG GACAACCTGG CCGCTGCTTA CGGCATTGCC
GTGACGACCA CGATGGTCAT TACCACGGTG CTCGCGGCGG TGGTGATGCG CTCTGTCTGG
CGTTGGCACC CGGCGCTGGT CACGCTCGTG AGCGCGTGCT TTCTGGTGGT CGACATGGCG
TTCTTCGCGG CCAACCTCTT GAAGATCCGC GATGGCGGCT GGTTCCCGTT GACGCTGGGT
GGCGCCGTGT TCTTCCTGCT GATGACCTGG TACAAGGGCA AAAAGCTGGT CCGCGCGCGC
AGCCTGGAGG ATGGCATCCC GCTTGAGCCA TTCCTGGCAG GTCTGCTGGC GCATCCGCCG
CATCGCGTGG AAGGTACTGC CGTGTTCCTG ACCGGCAATA CCGAATTCGT TCCGGTGTCC
CTCCTGCATA ACCTGAAACA CAATCGCGTA CTGCACGAGC GCGTGATCTT CATCAGCTTC
GTCACGCGGG ATATCCCGTA CGTGGACGAT AAGCACCGCG TGTCTGTGCG GGATCTGGGC
AGTGGCATCT ACATCGTCAA GGCGGAATAC GGCTTCAAGG AAACGCCGGA CGTGTACCGT
GTGCTCGAAC TCGGTCAGCC GCAGATCGGC TCGCGCTGTG AGCTGATGGA TACGTCGTTC
TTCATTGCGC GCGAGTCGGT GGTTCCGTCC AAGCTGCCGG GCATGTCTAT GTGGCGCGAG
CGGCTGTTTG CTTGGATGCA TCAGAACGGC GCCAAGCCAT CGGACTTCTT CCACATCCCC
GCGAACCGCG TGGTGGAACT GGGCACCAAG GTCGAGATCT GA
 
Protein sequence
MSQALTATGS PQTNVNLRAM VIGAVGVVFG DIGTSPLYSL KECFSPDHGI PFSSAAVLGI 
ISMLFWAMVI VVSLKYVLFV MRADNNGEGG ILALMALSLR TANTDSRRMS LLMMLGVFGA
CMFYGDAVIT PAISVLSAME GLEIAAPALS PFVLPITIVI LAALFLIQRS GTSVVGKLFG
PVMLLWFAAL AALGMMNLVK APQILVAVNP MYAISFLHDH ALQAFIVLGS VFLVLTGAEA
LYADMGHFGA RPIRWAWFFI VAPSLLVNYF GQGAMLLTDP STIENPFYRS VPEALQLPMV
VLAAAATVIA SQAVISGAFS LTSQAIQLGF VPRMRIRYTS EAEIGQIYVP MVNWMLLILV
VSVVLAFKKS DNLAAAYGIA VTTTMVITTV LAAVVMRSVW RWHPALVTLV SACFLVVDMA
FFAANLLKIR DGGWFPLTLG GAVFFLLMTW YKGKKLVRAR SLEDGIPLEP FLAGLLAHPP
HRVEGTAVFL TGNTEFVPVS LLHNLKHNRV LHERVIFISF VTRDIPYVDD KHRVSVRDLG
SGIYIVKAEY GFKETPDVYR VLELGQPQIG SRCELMDTSF FIARESVVPS KLPGMSMWRE
RLFAWMHQNG AKPSDFFHIP ANRVVELGTK VEI