Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1593 |
Symbol | |
ID | 8019241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1691148 |
End bp | 1693325 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830371 |
Product | helicase c2 |
Protein accession | YP_002981549 |
Protein GI | 241663189 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.601772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0255754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGCCTC CGTCATTTGA CCCCACGGAT TCCGCGTTGA CTTCGCTTTC CCCGCTGGCC GAGCCGTCGG CTGACTCCGA CGCCGCTGCC GGCGACGTTT CGGCTCCCGC CGCTTCTCTA CCTGCCGATG CGCATCATGC GGAGCTGTCG ACGCTGTTCG CCGACGACGG CACGCTCGCC AAGGGTATCG AGGGGTACCG GCCCCGCAGT GCGCAGCTGA CGATGGCGCA GGCCGTGGCC AACGCCATCG AAGCCGCCGA TTCGATCATC GTCGAGGCCG GGACCGGCAC GGGCAAAACG TACGCCTACC TTGTTCCCGC GATGCTTTGG GGCGGCAAGG TGATCGTCTC CACCGGGACG AAGAACCTGC AGGATCAGCT TTTCCTGCGC GACATCCCGA CGGTGCGCAA GGCGCTCAAT GCACCGGTGT CGGTGGCGTT GCTCAAGGGG CGCGCCAACT ACGTCTGCCA TTACCACGTC GAGCGCACGT CGCAGAACGG GCGTCTTTCT TCTCGCCAGG ATGCCGCATG GCTGCGGCAG ATCAATCTGT TCCTGAAGAC AACGAAAACG GGCGACAAGG CCGAACTTGC CAGCGTGCCC GAAAACGCGC CGGTGTGGAA CCTCGTCACG TCCACGCGCG ACAACTGCCT GGGTTCGGAC TGCGCATACT ACAAAGACTG CTTCGTCATG CGCGCCCGCA AGGAGGCGCA GCAGGCCGAC GTGGTGGTGG TGAACCATCA CCTGTTCTTT GCAGACGTGA TGTTGAAGGA CACCGGCATG GCGGAGTTGC TGCCCGCCGC CAACACGATC ATCTTCGACG AAGCGCACCA GCTGCCAGAA ACCGCCACGT TGTTCTTTGG CGAGACCATC TCCACGAACC AGATTCTCGA ACTCGCACGC GACAGCGTGG CCGAAGGCCT TTCGCATGCC CGCGATGCGG TGGATTGGGT CGCGATTGCC GCGCCGCTGG AGCGTGCCGC GCGTGATCTA CGCCTGGTCT TCCGCCAGGA TGGCTCACGC TTGTCGATCA AGCAGATCGA CAACGACGCG GCGATCGCCA AGCCGTTCTA CGAGGTGCTG CCGAAGCTAG AGCAGGCGCT TTCCGACTTT ACCGGCGCTC TGGAGGCCCA GGCGGAACGC GCGGAGACCA TCGAGCAATG CCATCGCCGC GCCGTGGCGC TGTGCGAGAA GCTTGAGGCG TGGGTCGATC CCAAGCCGCC AAAGGCGCCA AAGAAGGAAG GTGACGACGA GGGCAAGGAG GGCGAAAGCG CGGGGCCTGT CGATGAACGC GTGCGCTGGG TCGAGGTATT CGCCAACTCC GTGCAATTGC ATCTGACGCC ATTGTCGATC GCGCCGATTT TTTCGCGCCA GCGTGCCGGC CAGCCGCGCG CGTGGGTCTT CACGTCCGCT ACGCTTTCGG TGCGCGGCAA CTTCACGCAC TACGCTGCGC AGTTGGGCCT GGACCGTGAT CGCTCCATGA CGCTCGACAG CCCGTTCGAC TATGCATCGC AAGGCTTGCT CTATGTGCCG CGCGACCTGC CGCAGCCGAG CGACCCGCGC TTTACCGATG CGGTACTCGA CGCAACCTTG CCGCTGATCG AAGCGGCGGG CGGCAAGACT TTCCTTCTAT GCACGACGCT GCGCGCCGTG AACCGCGCCG CCGAACGATT GACGGACGAA TTCGCGCAAC GGGGCTGGGA TTACCCACTG CTCGTGCAGG GGCAGGCCAG CCGGACGGAA CTGCTGGACC GCTTCCGCGC GCTCGGCAAC GCGGTGCTGA TCGGTAGCCA GAGTTTCTGG GAAGGGGTGG ACGTACGCGG CGAGGCGCTC TCGCTGGTCG TCATCGACAA GTTGCCGTTT GCCCCGCCCG ATGACCCAGT GCTCAGTGCC CGCATGGAGG CGTTGGAGAA AAAGGGGCTG AGCCCGTTTG CCGTCCACCA GTTGCCGCAC GCAGTCATCA CGCTCAAGCA GGGCGCAGGG CGGTTGATTC GGTCCGAGAC CGATCGCGGT GTGCTGATGA TCTGCGACCC GCGGCTGGTC GAGAAAAACT ACGGTCGCCA GATCTGGCAG AGCCTGCCGC CGTTCAAGCG TACGCGCGAA GCCGAGACGG CGGCCGAATT CCTGCGGTCC CTGCGGCCGG ATCCGGATGT TCCGCAGCCG ACCGAAACGG ATGACTGA
|
Protein sequence | MRPPSFDPTD SALTSLSPLA EPSADSDAAA GDVSAPAASL PADAHHAELS TLFADDGTLA KGIEGYRPRS AQLTMAQAVA NAIEAADSII VEAGTGTGKT YAYLVPAMLW GGKVIVSTGT KNLQDQLFLR DIPTVRKALN APVSVALLKG RANYVCHYHV ERTSQNGRLS SRQDAAWLRQ INLFLKTTKT GDKAELASVP ENAPVWNLVT STRDNCLGSD CAYYKDCFVM RARKEAQQAD VVVVNHHLFF ADVMLKDTGM AELLPAANTI IFDEAHQLPE TATLFFGETI STNQILELAR DSVAEGLSHA RDAVDWVAIA APLERAARDL RLVFRQDGSR LSIKQIDNDA AIAKPFYEVL PKLEQALSDF TGALEAQAER AETIEQCHRR AVALCEKLEA WVDPKPPKAP KKEGDDEGKE GESAGPVDER VRWVEVFANS VQLHLTPLSI APIFSRQRAG QPRAWVFTSA TLSVRGNFTH YAAQLGLDRD RSMTLDSPFD YASQGLLYVP RDLPQPSDPR FTDAVLDATL PLIEAAGGKT FLLCTTLRAV NRAAERLTDE FAQRGWDYPL LVQGQASRTE LLDRFRALGN AVLIGSQSFW EGVDVRGEAL SLVVIDKLPF APPDDPVLSA RMEALEKKGL SPFAVHQLPH AVITLKQGAG RLIRSETDRG VLMICDPRLV EKNYGRQIWQ SLPPFKRTRE AETAAEFLRS LRPDPDVPQP TETDD
|
| |