| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1592 |
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| Symbol | |
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| ID | 8019240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1690222 |
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| End bp | 1691079 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644830370 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_002981548 |
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| Protein GI | 241663188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0525454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00850682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGTCA CGAGCGTAAA GCAGGCGCGT ATTGTTAGTC GAGTCGGCAA TCGAATCCGC
GCGCAAATCG GAGCAGTGTT GGTGGCAGGC GTTGCATGCC TTGCTATCTC GGCCTGCGGC
ATCCTGCCGG AACAGCAAGA CGAAACGGCT GGCTGGTCAG CCAACAAATT ATATTCGGAA
GCGAAGGACT CGCTCGACGG CGGCGACTAC GCCAAGGCGG TCAAGTACTA CGAAAAGCTC
GAAAGCCGCT ATCCGTTCGG CCCGTACGCC CAGCAAGCCC AGATCGAAAC CGCCTACGCC
AACTACAAGG ATGGTGAGAC GGCTGCCGCG CTGGCCGCGG TGGATCGCTT CATCCAGCTG
CACCCGAATC ACCCCAGCGT CGATTACGCC TACTACCTCA AGGGCCTGAT CAACTTCAAC
GACAACCTGG GCTGGCTCGG CCGCTTCTCG AACCAGGACT TGAGCGAGCG CGACCCGAAG
GCCGCACGCG CCGCCTACGA CGCCTTCAAG ACGCTGATCA CGCGTTTCCC GAACAGCAAG
TACACGCCGG ACGCCACCCA GCGCATGCAA TACATCGTCA ACGCAATGGC CGAGCATGAA
GTGGGCGCCG CACGCTACTA CTATCGCCGC GGCGCCTACC TGGCTGCCGT CAACCGCGCG
CAGGACGCCA TCAAGGATTA CGACCGCGCC CCGGCTGTGG AAGAAGCGCT GTACATCATG
ATGAAGTCGT ACGAAGCGCT GGGCATGAAA GACATGCGCG ACGACACCGA ACGCATCATC
AAGCAGAATT ACCCGAAGAG CGATTTCCTC GCCTACGGCC AGCGCAAGAA AGACAAGCCC
TGGTACCAAT GGTGGTAA
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| Protein sequence | MSVTSVKQAR IVSRVGNRIR AQIGAVLVAG VACLAISACG ILPEQQDETA GWSANKLYSE
AKDSLDGGDY AKAVKYYEKL ESRYPFGPYA QQAQIETAYA NYKDGETAAA LAAVDRFIQL
HPNHPSVDYA YYLKGLINFN DNLGWLGRFS NQDLSERDPK AARAAYDAFK TLITRFPNSK
YTPDATQRMQ YIVNAMAEHE VGAARYYYRR GAYLAAVNRA QDAIKDYDRA PAVEEALYIM
MKSYEALGMK DMRDDTERII KQNYPKSDFL AYGQRKKDKP WYQWW
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