| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1591 |
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| Symbol | |
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| ID | 8019239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1689094 |
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| End bp | 1690206 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830369 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002981547 |
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| Protein GI | 241663187 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.150486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00904495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAATC GCATCAAGCA TTATAGCCCA AGCCCTGTGT CAGACGACGC ACTGGCTGAC
GTTTCCCTCA CTGCGGCGGA GACGGAAGAC GCCCTCGATG ATGAGGCGCT CGATTTGCCT
GCCGCCGGTG CGGCCCAGCC AGCCGAGCCG ATCATCGTAG AGATTCCTGA AGCCATGCAC
GGCGAGCGCC TGGACAAGGC GCTTGCCAAG CTGCTGCCCG ACTATTCGCG TAGTCGCCTT
CAACAATGGA TTGATGCCGG CGCGGTTCGC CTGCATGGAG AGGTGGTGCG CCCGCGTGCG
GCCATCTCCG GCGGCGACCG CATCGAAGTC GTGCCGCAAC GCGCGGCGGA CGAAAACGCT
TTCGTTGCCG AGCCCATCGA TCTTGATGTG GTGTACGAAG ACGACACGCT GCTCGTCATC
AACAAGCCAG CCGGGCTGGT GGTGCATCCG GCTGCGGGCA ACTGGAGCGG CACGGTGCTC
AATGGCTTGC TGCACCGCTA TCCGGACGCC GTGGAGCTGC CGCGCGCCGG CATCGTCCAC
CGCCTCGACA AGGACACTTC CGGCCTGATG GTGGTCGCTC GTACGTTGCC AGCGCAAACC
GATCTCGTGC GGCAATTGCA GGCGCGTACC GTCAAGCGGA CTTATCTCGC GCTGGTGTGG
GGCGAGACAC CGGAAGAGGC CACGATCGAC GCGCCGATCG GCCGCGACCC GCGCGACCGC
ACGCGCATGG CCATCATCGA GACGGCCAGC GGCAAGCCGG CGCGCACGCA TTTCAAGACG
CTTGACGTGG TGGACCTCGG GCGCGCACAG GTGTCGCTGG TGCGCTGCCA GCTTGAGACC
GGCCGCACCC ACCAGATCCG GGTGCACTTT GAATCGGAGG GGCATCCGTT GCTTGGTGAT
CCGGTCTACA CGCGTAACTT CCGACGTGGT CAGCCGCAGA CGATCAAGGC GCCGCTGCCT
GTACCTTTTG CGCGGCAGGC GTTGCATGCA GTGCGCCTGG GGCTCGTGCA CCCAGCATCG
GGCAAATCGG TGCACTGGGA AGCCGGCGTG CCCGACGATT TTGCCGATTT GCTGGAAGCT
CTCGACCTGG ACCCCGATGC CGATGTCAAC TGA
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| Protein sequence | MKNRIKHYSP SPVSDDALAD VSLTAAETED ALDDEALDLP AAGAAQPAEP IIVEIPEAMH
GERLDKALAK LLPDYSRSRL QQWIDAGAVR LHGEVVRPRA AISGGDRIEV VPQRAADENA
FVAEPIDLDV VYEDDTLLVI NKPAGLVVHP AAGNWSGTVL NGLLHRYPDA VELPRAGIVH
RLDKDTSGLM VVARTLPAQT DLVRQLQART VKRTYLALVW GETPEEATID APIGRDPRDR
TRMAIIETAS GKPARTHFKT LDVVDLGRAQ VSLVRCQLET GRTHQIRVHF ESEGHPLLGD
PVYTRNFRRG QPQTIKAPLP VPFARQALHA VRLGLVHPAS GKSVHWEAGV PDDFADLLEA
LDLDPDADVN
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