Gene Rpic12D_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1590 
Symbol 
ID8019238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1688301 
End bp1689110 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID644830368 
Productprotein of unknown function DUF152 
Protein accessionYP_002981546 
Protein GI241663186 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.840086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0159691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT CAACTGACTG GATCGTTCCG GACTGGCCAG CGCATCCGCA TGTGAAAGCG 
CTAGCCACGA CCCGCTTCGG TGGCGTCAGC ACCGGGCCCT ACGGACTGGC TGGCGGCTTG
CCCGGCGGTC TGAACCTTGG CCGGCACGTG GGTGACGCGC CAGAGGCGGT CGAACAAAAC
CGCCGCATCC TACGTGCAGC ACTACCTGCC GAGCCGACGT GGATGGAGCA GGTGCACGGC
ACCGATGTGG CTGATCTTGA TCAACTCGTT GGTACTTCAG CGCCTGTGGT CGCCGATGCG
GCGGTGGCGT CTTGGCGGGA TCGCGTCTGC GTGGTCATGA CGGCCGATTG CCTGCCTGTC
TTGCTGAGCG ATGCTCGCGG CGTAACCGTG GGCGCCGCGC ATGCGGGCTG GCGTGGTCTC
TGTGGCTGCG TGATCGAGCG CACGCTCGAT GCCATGATGC AGCGGCTGCG TGCCAGCGGC
CAGGAGGCCG ATCCGACGTG GCTGGCGTGG CTCGGGCCAG CCATCGGGCC ATCGTGTTTT
GAAGTGGGTG CGGAAGTGCG TCAGGCATTT ATCGACGCTG CGCAGCCCGA CGAATTGCCC
GCCACCGAGG CGGCGTTCGT GGAAGGCGCC TCGGCTGACA AGTTCTTCGC TGATCTGTAT
GCGCTGGCCC GACTGCGGCT GGCACGCGTG GGCTGTACCA ACGTGTACGG CGGTGGCCTG
TGCACGATGA CGGACGCTGA CCGCTTCTAT TCGTACCGAC GGGAGCGCAT CACAGGCCGT
ATGGCCACGC TGATCTGGCG CGCAGAGTAA
 
Protein sequence
MPMSTDWIVP DWPAHPHVKA LATTRFGGVS TGPYGLAGGL PGGLNLGRHV GDAPEAVEQN 
RRILRAALPA EPTWMEQVHG TDVADLDQLV GTSAPVVADA AVASWRDRVC VVMTADCLPV
LLSDARGVTV GAAHAGWRGL CGCVIERTLD AMMQRLRASG QEADPTWLAW LGPAIGPSCF
EVGAEVRQAF IDAAQPDELP ATEAAFVEGA SADKFFADLY ALARLRLARV GCTNVYGGGL
CTMTDADRFY SYRRERITGR MATLIWRAE