Gene Rpic12D_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1587 
Symbol 
ID8019235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1684726 
End bp1685907 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID644830365 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002981543 
Protein GI241663183 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.019286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG TTGTGATCGT ATCGGCGGTA CGCACCGCCG TGGGCAAGTT TGGTGGCTCG 
CTGGCGAAGA TTGCTGCGCC TGAGCTGGGC GCGGCTGTCA TCCGCGAAGC GCTGGCGCGT
GCCAAGGTGG CGCCGGACCA GGTGAGCGAA GTCATCATGG GCCAGGTGCT GACGGCAGGT
TCGGGGCAGA ACCCGGCGCG CCAGGCCGTC ATCAAGGCTG GGCTGCCGAA CATGGTGCCG
GGCCTGACTA TCAACAAGGT GTGCGGCTCC GGCCTGAAGG CCGTGATGCT GGCCGCCAAC
GCCATCATCG CGGGCGATGC CGAGATCGTC GTGGCTGGCG GCCAGGAAAA CATGTCCGCC
GCGCCGCACG TCCTGCCGGG CTCGCGCGAC GGTTTCCGCA TGGGCGATGC CAAGCTCATC
GACTCGATGA TTGTGGATGG GCTATGGGAC GTCTACAACC AGTACCACAT GGGCATCACG
GCCGAGAACG TTGCCAAGGA ATACGGCATC ACGCGTGAAG CGCAGGACGA GTTTGCCGTT
GCGTCGCAGA ACAAGGCCGA AGCTGCGCAG AAGTCGGGCC GGTTCAATGA CGAGATCGTT
CCGATCCTGA TTCCGCAGCG CAAGGGCGAT CCGATTGCCT TTGCGCAGGA TGAGTTCGTT
CGCCATGGCG CCACGCTCGA GTCGATGGCT GGCCTGAAAC CCGCCTTTGA CAAGGCCGGC
ACAGTGACGG CGGCCAACGC CTCTGGCCTG AACGATGGCG CCGCCGCTGT CGTGGTGATG
TCGGCCGCCA AGGCCAAGGA GCTGGGCTTG ACACCGCTGG CAACGATCCG TGCATACGCC
AGCGCAGGCC TGGACCCGAA GGTCATGGGC ATGGGGCCGG TGCCGGCATC GAAGCGCTGC
CTGTCGCGCG CCGGCTGGTC GGTGGGCGAT CTGGACCTGA TGGAAATCAA CGAGGCGTTC
GCCGCTCAGG CGCTGGCCGT GCATCAACAG ATGGGCTGGG ATACGTCCAA GATCAACGTC
AATGGTGGTG CGATTGCGAT CGGTCACCCG ATCGGCGCGT CGGGGTGCCG CATCCTGGTC
ACGCTGCTGC ATGAAATGCA GAAGCGCGAT GCGAAGAAGG GCCTGGCCTC GCTGTGTATC
GGCGGCGGCA TGGGCGTGGC GCTGGCAGTT GAGCGTCCGT AA
 
Protein sequence
MTDVVIVSAV RTAVGKFGGS LAKIAAPELG AAVIREALAR AKVAPDQVSE VIMGQVLTAG 
SGQNPARQAV IKAGLPNMVP GLTINKVCGS GLKAVMLAAN AIIAGDAEIV VAGGQENMSA
APHVLPGSRD GFRMGDAKLI DSMIVDGLWD VYNQYHMGIT AENVAKEYGI TREAQDEFAV
ASQNKAEAAQ KSGRFNDEIV PILIPQRKGD PIAFAQDEFV RHGATLESMA GLKPAFDKAG
TVTAANASGL NDGAAAVVVM SAAKAKELGL TPLATIRAYA SAGLDPKVMG MGPVPASKRC
LSRAGWSVGD LDLMEINEAF AAQALAVHQQ MGWDTSKINV NGGAIAIGHP IGASGCRILV
TLLHEMQKRD AKKGLASLCI GGGMGVALAV ERP