Gene Rpic12D_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1585 
Symbol 
ID8019233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1683865 
End bp1684605 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content62% 
IMG OID644830363 
Productacetyacetyl-CoA reductase 
Protein accessionYP_002981541 
Protein GI241663181 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.633023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0323128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GCATCGCATA CGTCACCGGT GGCATGGGCG GTATCGGAAC GGCGATTTGC 
CAGCGCTTGG CGCGCGACGG CTTCACCGTT GTCGCAGGCT GCGGCCCGAA CTCGCCGCGC
AAGGCGAAAT GGCTGGAACA ACAGAAGGCG CTTGGTTTCG ATTTCGTGCC GTCCGAAGGC
AACGTCGGTG ATTGGGAGTC GACCAAGGCT GCGTTCGACA AGGTGAAGGC CGAAGTCGGC
GAGGTGGACG TCCTGATCAA CAACGCCGGT ATCACGCGCG ACGTGGTCTT CCGCAAGATG
ACCCGCGCCG ACTGGGATGC GGTGATCGAC ACCAACCTGA CGTCGCTGTT CAACGTGACG
AAGCAGGTCA TCGACGGCAT GGCGGATCGC GGCTGGGGCC GAATCATCAA CATCTCGTCG
GTGAATGGCC AGAAGGGCCA GTTTGGCCAG ACCAACTACT CCACCGCCAA GGCCGGCCTG
CACGGCTTCA CGATGGCGCT GGCGCAGGAA GTCGCGACCA AGGGCGTGAC GGTCAACACG
GTGTCGCCGG GCTATATCGC GACCGACATG GTGAAGGCCA TTCGTCAGGA TGTGCTCGAC
AAGATCGTCA GCACGATTCC GGTCAAGCGC TTGGGCGAAC CGACCGAGAT TGCCTCGATC
TGCGCATGGC TGGCATCTGA AGAATCCGGC TTCTCCACCG GCGCGGACTT CTCCCTGAAC
GGCGGCCTGC ACATGGGCTG A
 
Protein sequence
MTKRIAYVTG GMGGIGTAIC QRLARDGFTV VAGCGPNSPR KAKWLEQQKA LGFDFVPSEG 
NVGDWESTKA AFDKVKAEVG EVDVLINNAG ITRDVVFRKM TRADWDAVID TNLTSLFNVT
KQVIDGMADR GWGRIINISS VNGQKGQFGQ TNYSTAKAGL HGFTMALAQE VATKGVTVNT
VSPGYIATDM VKAIRQDVLD KIVSTIPVKR LGEPTEIASI CAWLASEESG FSTGADFSLN
GGLHMG