Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1584 |
Symbol | |
ID | 8019232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1682906 |
End bp | 1683460 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644830362 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_002981540 |
Protein GI | 241663180 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.12068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0154417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCA GCAAGAAGGG CACCGAACGG CTGATCAAGA AATATCCCAA CCGCCGACTC TACGATACCC AGACCAGCAC GTACATCACA CTGGCAGACG TCAAGCAGCT CGTCATGGAG ACCGAAGAGT TTCGCGTCGT CGATGCGAAA TCCGGTGAGG ACCTGACTCG CAGTATCCTG CTGCAGATCA TTCTGGAAGA GGAAACAGGC GGCGTGCCGA TGTTCTCCGG CGCGATGCTC GCGCAGATCA TCCGTTTCTA TGGAAACGCC ATGCAGGGCA TGATGGGCAC GTACCTGGAA AAGAACATCC AGGCGTTTGT CGACATCCAG AGCAAGCTGG CCGAGAACTC GAAGGACCTG TACAGCGGCA ACACGTTCAA CCCCGACATG TGGTCGCAGT TCATGAACAT GCAGGGGCCG ATGATGCAAG GCATGATGAG CAACTACATC GAGCAGAGCA AAAACCTGTT CGTGCAGATG CAGGAGCAGA TGCAGAGCCA GGCAAAGAAC ATGTTCGGGA CGTTCCCGTT CAATCAGCCG CCCGAGAAGA AGTAA
|
Protein sequence | MATSKKGTER LIKKYPNRRL YDTQTSTYIT LADVKQLVME TEEFRVVDAK SGEDLTRSIL LQIILEEETG GVPMFSGAML AQIIRFYGNA MQGMMGTYLE KNIQAFVDIQ SKLAENSKDL YSGNTFNPDM WSQFMNMQGP MMQGMMSNYI EQSKNLFVQM QEQMQSQAKN MFGTFPFNQP PEKK
|
| |