| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1582 |
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| Symbol | rimO |
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| ID | 8019230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1680299 |
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| End bp | 1681660 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830360 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_002981538 |
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| Protein GI | 241663178 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.386337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0216178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG TCAGTACCCA GAGCCCCAAG GTGGGGTTCG TCAGTCTCGG TTGTCCCAAG
GCCTTGGTCG ATTCCGAGCA GATCATCACC CAACTGCGTG CGGAGGGGTA TGAGATTTCC
GGCACGTACG GCGGGGCGGA CCTAGTGGTC GTGAACACCT GCGGTTTCAT CGACGAGGCC
GTGCAGGAAA GCCTGGATGC GATTGGCGAG GCGCTGGCCG AGAACGGCAA GGTGATCGTG
ACCGGCTGCC TGGGTGCCAA AAAGGACGCT GCCGGCCAAG ACATCATCAC CAGCGTGCAC
CCGAAGGTGC TGGCTGTGAC CGGGCCGCAT GCGCTGGGCG AGGTGATGGA GGCAGTGCAC
ACGCACCTAC CCAAGCCGCA CGACCCGTTC ATTGACCTTG TGCCGCCACA GGGCATCAAG
CTGACGCCCA AGCACTACGC GTATCTGAAG ATTTCCGAGG GCTGCAACCA CCGTTGCAGC
TTCTGCATCA TCCCGTCGAT GCGCGGCGAT CTTGTCTCGC GCCCGGTGGC AGAAGTGATG
CTGGAGGCCG AAAACCTGCT GAAGGCCGGC GTGAAGGAGC TGCTTGTCAT CTCGCAGGAC
ACCAGCGCTT ATGGGGTAGA CGTCAAATTC CGCATGGGCT TCTGGAACGG TCGCCCGCTG
AAGACGCGCA TGACCGAGCT GGTGGGTGCG CTGGGTGAAC TGGCGGCGCA GTACGGCGCC
TGGGTGCGCC TGCACTATGT CTACCCGTAT CCGAGCGTGG ATGAGGTGAT GCCGCTAATG
GCCGAGGGCA AGGTCCTTCC GTATCTGGAC GTGCCGCTGC AACACGCCCA CCCCGACGTG
CTCAAGCGCA TGAAGCGGCC GGCCAACGCC GAAAAAACGT TGGACCGCAT CCGCGCCTGG
CGCGAGGTAT GCCCAGAGCT GACCATCCGC AGCACGTTCA TTGCCGGTTT CCCGGGCGAG
ACGGAAGAGG AGTTCCAAAC GCTGCTCGAC TTCATTGCCG AGGCCGAGCT GGACCGCGTG
GGCTGCTTCG CCTATTCGCC GGTGGAGGGC GCCACCGCCA ACGACCTGCC GGGCGCATTG
CCCGATGAGG TGCGCGAGGA GCGCCGCGCG CGCTTCATGG AAGTCGCCGA GCGCGTGTCT
GCGCGCCGTC TGCAGCGCAA GGTTGGCAAG TCGCTGCGCG TGCTTGTGGA CGAAGTGAAT
CAGGACGGCG GCATCGGCCG TTCATCGGCG GATGCCCCGG AGATTGACGG CCTCGTCTAT
ATCGCGCCGC CGTCGAAGCC GTACAAGCGC TATAAGGCGG GCGATTTCGT GTCGGTCAAG
ATTACCGGCG CGGATGGCCA CGACCTGTGG GGCGAGGTCT GA
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| Protein sequence | MSDVSTQSPK VGFVSLGCPK ALVDSEQIIT QLRAEGYEIS GTYGGADLVV VNTCGFIDEA
VQESLDAIGE ALAENGKVIV TGCLGAKKDA AGQDIITSVH PKVLAVTGPH ALGEVMEAVH
THLPKPHDPF IDLVPPQGIK LTPKHYAYLK ISEGCNHRCS FCIIPSMRGD LVSRPVAEVM
LEAENLLKAG VKELLVISQD TSAYGVDVKF RMGFWNGRPL KTRMTELVGA LGELAAQYGA
WVRLHYVYPY PSVDEVMPLM AEGKVLPYLD VPLQHAHPDV LKRMKRPANA EKTLDRIRAW
REVCPELTIR STFIAGFPGE TEEEFQTLLD FIAEAELDRV GCFAYSPVEG ATANDLPGAL
PDEVREERRA RFMEVAERVS ARRLQRKVGK SLRVLVDEVN QDGGIGRSSA DAPEIDGLVY
IAPPSKPYKR YKAGDFVSVK ITGADGHDLW GEV
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