| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1579 |
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| Symbol | |
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| ID | 8019227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1677056 |
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| End bp | 1678267 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830357 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002981535 |
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| Protein GI | 241663175 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.55911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0365901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACG ACACCAAGCT CCCGCCGATG TTTCCCGCGA CCCAGGCGGT ACACCCGGAA
TTGCAGATCC CGCCGGGCTT TGCAGCGTTC TCGCATGCCA CGCATCGTGC GTCGACCGTG
GTGTTCAAGA ATCTTGCCGA TATGCGCGCC TTCGGCAGCG GCAGCGTGGT GCACTGGCGC
TATGGCCTGC ATGCCACGCC AACTTCCGAC ACGCTGTGCC AGGCCCTTGC GCAGATCGAA
GGCGGTTCGC ACACGCTGCT GCTGCCTTCC GGGCTGGCGG CGATTTCGCT GGTGTACTTC
ACGCTTATCA AATCCGGCGA CGACGTGCTG ATTCCAGACA ACGCCTATGG CCCGAACCGT
GACCACGGCG AATGGATGGC GCGCCAGTTC GGCATTACCG TGCGCTATTA CGATCCGATG
ATCGGCGCCG GCATTGCCGA CCTGATCCGT CACAACACCA AACTCGTGTG GCTCGAAGCG
CCGGGTTCGG TGACGATGGA GGTGCCCGAT TGCACGGCCA TCGCCGAGGT GGCGCGCAAG
GCCGGCGCCA TTACGGCAAT CGACAACACG TGGAGTGGAG GCGTGTATTA CCAGCCTTTC
GAGCACGGTA TCGACATCTC CGTGCAAGCG CTGACCAAGT ACCAATCAGG CGGCAGCGAC
GTGCTCATGG GTGCCGCCAT CACGAATGAC GAAGCGCTGC ACCACAAGCT GCTGGCCACG
CGGATGCGCA TGGGCTGGGG CGTTTCGGCG GACGATTGCT ATTTCGTGCT ACGTGGCCTG
CCGAGCCTGC CGACGCGCTT GGCGGCGCAC GACTCGCATG CCCGCGAAGT GGCCGAATGG
CTGGCGGATC GGCCGGAAGT CGTGCGCGTT CTGCACCCGG CGCTGCCGGA TTGTCCGGGC
CATGAAAACT GGAAACGCGA CTTTACCGGC GCGAGCGGGT TGTTCTCGAT CGTGCTGCAC
GAGCGCTATT CGCAGGCGCA GATCGATGCC TTTATCGAAG GCCTGCGTTA CTTTGCGATC
GGTTTTTCGT GGGGCGGGGC GCACAGCCTC GCGCTGCCGT ACAACATCCC GTCGATGCGC
ACAGCGACCG CCTGGCCGCC GGCTGATTGG GAGAACGCGG GCGGTTTCGT GCGGCTGTAT
ATCGGGCTGG AAGATCCGCG TGATTTGATT GCGGATTTGA AGCAGGCGAT GGAAACGCAC
CTGGGGGCTT GA
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| Protein sequence | MNDDTKLPPM FPATQAVHPE LQIPPGFAAF SHATHRASTV VFKNLADMRA FGSGSVVHWR
YGLHATPTSD TLCQALAQIE GGSHTLLLPS GLAAISLVYF TLIKSGDDVL IPDNAYGPNR
DHGEWMARQF GITVRYYDPM IGAGIADLIR HNTKLVWLEA PGSVTMEVPD CTAIAEVARK
AGAITAIDNT WSGGVYYQPF EHGIDISVQA LTKYQSGGSD VLMGAAITND EALHHKLLAT
RMRMGWGVSA DDCYFVLRGL PSLPTRLAAH DSHAREVAEW LADRPEVVRV LHPALPDCPG
HENWKRDFTG ASGLFSIVLH ERYSQAQIDA FIEGLRYFAI GFSWGGAHSL ALPYNIPSMR
TATAWPPADW ENAGGFVRLY IGLEDPRDLI ADLKQAMETH LGA
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