| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1574 |
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| Symbol | ispD |
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| ID | 8019222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1669349 |
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| End bp | 1670107 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644830352 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002981530 |
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| Protein GI | 241663170 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.214959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0591838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATTT CCCACCCTGG CCGACGCCGT TTTGCGCTGA TTCCCTCGGC CGGCACCGGC
TCGCGCGCCG GCGGCGATCT GCCCAAGCAA TATCAGGCGA TTGCCGGGCG GCCGATGCTG
TGGCACACGG CACAGGCATT CCTGGCCAGC CCCGAAATCG ACTCTGTGCT GGTGGTGACG
ACACCCGGCG CACAGCCGCT CGTGCAACGC TTTCCCGACG CGGGTTTTAA CGCAGCGAGG
CTGGTGGAGG TCGATTGCGG TGGCGATTCG CGCCATGCAT CCGTCACGCA AGGGTTGGCG
GCGTTGCGCC GGCTGGGCGC ACGCGATGAC GACTGGGTGC TCGTGCACGA TGCGGCCCGC
CCCGGGTTGA CGCCCGCCCT GATCGCGCGG CTGGTCGCGG CCGTTGAGGC CGAAGGCACG
CAAGCTGCGG GGGGCATCCT GGCGCTGCCC GTGGCCGACA CGCTCAAACG CGCCGATGCG
GCACAGCACA TTGTTGCGAC CCTGCCGCGC GATGGCCTGT GGCAAGCGCA GACGCCGCAG
ATGTTTCCGC TTGGCCTGCT GGAGCGCGCC TTGCGGGAGG CGCTGTTGCA GCATCGCATC
GTCACCGACG AGGCCAGCGC AATTGAAGCC GCCGGTTACC CGCCGTTGCT TGTGCCCGGC
GCATTGCGCA ACTTCAAAGT GACGTATCCC GATGATTTCG CGCTCGCCGA GGCCATCCTC
GCGCAGAGCG CACCACCCGA CGAGGCATCG CAAGCATGA
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| Protein sequence | MSISHPGRRR FALIPSAGTG SRAGGDLPKQ YQAIAGRPML WHTAQAFLAS PEIDSVLVVT
TPGAQPLVQR FPDAGFNAAR LVEVDCGGDS RHASVTQGLA ALRRLGARDD DWVLVHDAAR
PGLTPALIAR LVAAVEAEGT QAAGGILALP VADTLKRADA AQHIVATLPR DGLWQAQTPQ
MFPLGLLERA LREALLQHRI VTDEASAIEA AGYPPLLVPG ALRNFKVTYP DDFALAEAIL
AQSAPPDEAS QA
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