| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1534 |
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| Symbol | |
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| ID | 8019181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1625018 |
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| End bp | 1627432 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830313 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_002981492 |
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| Protein GI | 241663132 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.254924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAA CCCAACTTTT ACCCGCTGAG CAGATTCGCC TGCCGCTGTT GCCGCTGCGT
GACGTGGTGG TGTTTCCGCA CATGGTGATT CCGCTGTTCG TGGGGCGCCC CAAATCCATC
AAGGCGCTGG AAGCTGCGAT GGAAGCGGGC AAGAGCATCA TGCTCGTTGC GCAAAAGACG
GCCGCCAAGG ACGAGCCGAC CGACAAGGAT CTGTACGAGG TCGGCTGTAT CGCGAACATT
CTGCAGATGC TGAAGCTACC GGACGGCACC GTGAAGGTGC TGGTCGAGGG CACTCAGCGC
GCCAACATCC TGTCCGTCAC CGACGACGAA TCTCACTTCT TCTGCGAAGC GGTACCCGTC
GGCCCGGAAC CGACTGAATC GGCTGAGACC GAGGCGCTGC GTCGCGCCAT CGTGTCGCAG
TTCGACCAGT ACGTGAAGCT GAACAAAAAG ATCCCGCCGG AGATTCTGAC TTCGCTGTCG
GGTATCGACG AACCCGGTCG CTTGGCTGAC ACCATTGCCG CACATCTGCC GATCAAGCTC
GAGCAGAAGC AGAAGATTCT CGAGATGTTC AACGTGACCG AACGTCTGGA GAGCCTGCTG
TCGCAGCTGG AAGGCGAGAT CGACATCCTG CAGGTGGAAA AGCGCATCCG TGGCCGCGTC
AAGCGCCAGA TGGAGAAGAG CCAGCGCGAG TACTACCTGA ACGAGCAGGT CAAGGCCATC
CAGAAGGAGC TGGGCGAAGG CGAGGAAGGC GCCGATCTCG AAGAGCTGGA CAAGAAGATC
AAGGCCGCCC GCATGCCGAA GGAGGCCAAG AAGAAGGCCG AGTCCGAGTT CAAGAAGCTC
AAGCTGATGT CGCCGATGTC GGCCGAGGCG ACGGTCGTGC GCAACTATAT CGACACGTTG
GTGGGTCTGC CGTGGCGCAA GAAGAGCAAG GTCAACAACG ACCTGTCGAA CGCCGAGCAG
GTGCTGGATC AAGACCACTA CGGTTTGGAA AAGGTCAAGG AACGTATCCT TGAGTATCTC
GCCGTGCAAC AGCGCGTCGA CAAGCTCAAA GCGCCGATCC TGTGCCTCGT GGGGCCGCCG
GGTGTTGGCA AGACCTCGCT CGGGCAGTCG GTGGCGCGTG CAACGAACCG CAAGTTCGTG
CGCATGGCGC TGGGTGGCGT GCGTGACGAG GCCGAGATTC GCGGTCACCG CCGTACGTAC
ATCGGTTCGA TGCCGGGCAA GATCCTGCAG AGCCTGACGA AGGTCGGCGT GCGCAACCCA
CTGTTCCTGC TCGACGAGAT CGACAAGATG GGTGCGGATT TCCGCGGCGA CCCGTCGTCT
GCATTGCTCG AAGTGCTGGA CCCGGAACAG AACCACACGT TCCAGGACCA CTACATCGAA
GTGGACTTCG ACCTGTCGGA TGTGATGTTC GTGGCGACGT CGAACTCGCT GAACATTCCG
GCGCCGCTGC TGGACCGAAT GGAAGTGATT CGCCTGTCGG GTTACACGGA AGACGAAAAG
GTCAACATCG CCCGTCGCTA CTTGCTGCCC AAGCAGATCA AGAACAATGG TCTGAAGGAG
GGCGAGATCG AGGTGACCGA AGCCGCGCTG CGCGACATCA TCCGCTACTA CACGCGGGAA
GCCGGTGTTC GTTCGCTGGA ACGCGAGGTC TCGAAGATCT GCCGCAAGGT CGTCAAGCAA
TTGCTGCTGA AGAAGGAAGC CAATACGTCC GTGAAGGTGG ATTCGGACAA CCTGGACAAA
TTCCTTGGCG TGCGTCGTTT CGACTTTGGT CTGGCCGGCA AGGAAGACCA GGTCGGCCAG
GTGACCGGTT TGGCATGGAC CGAAGTGGGC GGCGATCTGC TGACCATCGA AGCCGCGCTG
ATGCCGGGCA AGGGCAACAT CACCCGCACG GGTTCGCTGG GCGATGTGAT GAAGGAGTCC
GTCGAGGCTG CGCGCTCGGT GGTGCGTTCG CGGTCGGCTC GGCTGGGTAT CAAGGATGAG
ATGTTCGAGA AGCGTGACAT CCACATCCAC GTACCCGAAG GTGCGACGCC CAAGGATGGC
CCGTCGGCAG GTATTGCAAT GACGACGGCG CTGGTGTCGG TGCTGACTGG TATTCCGGTG
CGCGCAGACG TGGCAATGAC CGGCGAAATC ACCCTGCGCG GCGAAGTGTT GCCGATCGGT
GGCTTGAAGG AAAAGCTGCT GGCCGCTCAC CGCGGTGGCA TCAAGCTCGC GCTGATTCCG
GAAGAGAACG TCAAGGACTT GGCTGACATT CCGGACAACG TAAAGAACAG CATCGAGATT
CAGCCGGTCC GCTGGATCGA CAAGGTGCTG GAACTCGCGC TGGTGCGTAA GCCGGAGCCG
CTGCCGGAAG AAGAAGCCAA GCCGGCGCCC GCCCAGGGCG ATGACGGCAA GTCGCAGGAA
ATGGTGCATC ACTGA
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| Protein sequence | MSGTQLLPAE QIRLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMEAG KSIMLVAQKT
AAKDEPTDKD LYEVGCIANI LQMLKLPDGT VKVLVEGTQR ANILSVTDDE SHFFCEAVPV
GPEPTESAET EALRRAIVSQ FDQYVKLNKK IPPEILTSLS GIDEPGRLAD TIAAHLPIKL
EQKQKILEMF NVTERLESLL SQLEGEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI
QKELGEGEEG ADLEELDKKI KAARMPKEAK KKAESEFKKL KLMSPMSAEA TVVRNYIDTL
VGLPWRKKSK VNNDLSNAEQ VLDQDHYGLE KVKERILEYL AVQQRVDKLK APILCLVGPP
GVGKTSLGQS VARATNRKFV RMALGGVRDE AEIRGHRRTY IGSMPGKILQ SLTKVGVRNP
LFLLDEIDKM GADFRGDPSS ALLEVLDPEQ NHTFQDHYIE VDFDLSDVMF VATSNSLNIP
APLLDRMEVI RLSGYTEDEK VNIARRYLLP KQIKNNGLKE GEIEVTEAAL RDIIRYYTRE
AGVRSLEREV SKICRKVVKQ LLLKKEANTS VKVDSDNLDK FLGVRRFDFG LAGKEDQVGQ
VTGLAWTEVG GDLLTIEAAL MPGKGNITRT GSLGDVMKES VEAARSVVRS RSARLGIKDE
MFEKRDIHIH VPEGATPKDG PSAGIAMTTA LVSVLTGIPV RADVAMTGEI TLRGEVLPIG
GLKEKLLAAH RGGIKLALIP EENVKDLADI PDNVKNSIEI QPVRWIDKVL ELALVRKPEP
LPEEEAKPAP AQGDDGKSQE MVHH
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