Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1527 |
Symbol | |
ID | 8019172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1616677 |
End bp | 1618272 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644830304 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_002981485 |
Protein GI | 241663125 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.643488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.335611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTCAC ACCCCGCCTG GCGCGAAATC CTGATCGACG GAGCCTTGGC CGCTCACACC GGCGCCGACC TGCTCTTCGG CACAGCGGGC GTCCGCGCGC TGGAAGCAGC TGCGTACCGA ACCCTCGAAC CCTTCACCTT GATGGCCAGG GCGGGCGAAG CCGCCGCCGA CTGGCTGCAG ACGCGCGCGC CACACGGGCA TGTCCTGCTC GTTGCCGGCC CAGGCAACAA CGGTGGCGAT GCGCTCGTTG CGGCGACGGT GCTGCATCTG GCCGGGCGCG CCGTCACGGT GTGGCTTGCC GCCGACCCGG CCAAGCTGCC TGATGACGCG CGCCGCGCCT GGACGGAGGC TTGTGCCGCG AATGTTCCCA TTGAACCTCT GCACACGGCA GCTTCGGTGC CGGCGGCTGC CTCCGTCATC GTCGACGGTC TCTTTGGTAT CGGACTCGCC CGGCCGCTGA CGGGGTTGCA TGCCGCACTG GTCGACACCA TCAATGCCAG CGGCTTGCCG GTGTACGCAC TGGACATTCC CTCCGGGCTG AACGGCGATA CGGGTCAACC GCCCGCCGCT GAGTCCCCCG TTATCCAGGC GCGCGCCACC ATCACCTTCC TGGCGGTCAA GCCGGGCTTG CTGACGGGGG ATGGCCGCGA TGCCTCCGGC GACATTGCGC TGGCCGATCT GCAAGCCGCA CAACCGGCTT ATGACGGCGT GATTGAAGCG GACGCCTTCG TCAACACGCC GTCACGCTGG CTCCCGCACG TGCCGCGCCG GCGGCATAAC GGCCACAAAG GTACCTACGG CAGTGCGGCA ATCGTGGGCG GTGCGGCAGG CATGGTCGGA GCGCCGCTGC TGTCGGCGCG CGGCGCGCTC CATCTGGGCG CGGGCAAGGT GCACGTCGTC TCGCTTGCGT CCGATGCTCC GCGTGTCGAC GCCGCGCAAC CTGAATTGAT GCTGCACAGT TGGGGCACCC TTGATCTGGG TGGCATGCAG GCGCTGGCCC TGGGCCCCGG CATGGGCACC GGCAAAGAAT CGGAAGCCGC GCTCGAGCAT CTGCTGGACC GCATGCTGTC GGTGCGCACG CCCGCCGTGT TCGACGCCGA TGCACTGAAC CTCTTTGCGA AAACGCCGGC GCTGCTCGCA CGGCTCACGC AGTTGGCCGG AAGCGGTGTG CCGTTGGTGC TGACGCCGCA TCCGCTGGAA GCCGCGCGCC TACTGCAGAC CGAGGCGCGC GCCGTGCAAC AGGACCGACT TGCCGCCGCT CAGGCGCTTG TCAATCGGAC GGGCGCGGTG GTCGTGCTCA AAGGCTCGGG CACAGTCATC GCGGCGCCTG GCATCCAGCC GGCCATCAAC CCAACCGGCA ACGGCGGGCT CGCCACCGGG GGGACCGGCG ATGTGCTGAC CGGCATGATC GGCGCACTGC TTGCGCAAGG CATGGGCGCG CGCGAAGCCG CACTGGCGGC TGTATGGCTG CACGGGCGAG CCGCCGATGA CCTCGTCCAC GCGGGCGTCG GCCCCATCGG CCTGCACGCA AGCGAGCTAT GCGCGCCGGC GCGAGGCGCT CTCAACGCCT TGCTGGCGTC GGACGTTCGC CGATAG
|
Protein sequence | MSSHPAWREI LIDGALAAHT GADLLFGTAG VRALEAAAYR TLEPFTLMAR AGEAAADWLQ TRAPHGHVLL VAGPGNNGGD ALVAATVLHL AGRAVTVWLA ADPAKLPDDA RRAWTEACAA NVPIEPLHTA ASVPAAASVI VDGLFGIGLA RPLTGLHAAL VDTINASGLP VYALDIPSGL NGDTGQPPAA ESPVIQARAT ITFLAVKPGL LTGDGRDASG DIALADLQAA QPAYDGVIEA DAFVNTPSRW LPHVPRRRHN GHKGTYGSAA IVGGAAGMVG APLLSARGAL HLGAGKVHVV SLASDAPRVD AAQPELMLHS WGTLDLGGMQ ALALGPGMGT GKESEAALEH LLDRMLSVRT PAVFDADALN LFAKTPALLA RLTQLAGSGV PLVLTPHPLE AARLLQTEAR AVQQDRLAAA QALVNRTGAV VVLKGSGTVI AAPGIQPAIN PTGNGGLATG GTGDVLTGMI GALLAQGMGA REAALAAVWL HGRAADDLVH AGVGPIGLHA SELCAPARGA LNALLASDVR R
|
| |