| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1520 |
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| Symbol | |
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| ID | 8019165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1605474 |
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| End bp | 1606742 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830297 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002981478 |
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| Protein GI | 241663118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.030853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.984041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG CGGCTGAATC GGTTCCGGAA TCGACGGCCA AACTCAAACG CGAACTGAAG
AGCGCTGAGG CGCGCAGGCG TGCCATGGCT CTGGCGCTGG TGGCGCCGCT CGCCATCTTC
CTGCTGCTGA TCTTTGTCGT GCCGATCGGC GCCCTGCTCA CGCGCGCCGT GCAGAACCCC
GAGGTGGCCG ACGCGCTGCC AAAAACCGTC GTCGCCCTGA AGGGCTGGGA CCGCAAGAGC
CCGCCGGCCG ATGCCGCCTA CGCCGCGCTC GCCGAAGACC TCACGACCGT GAGCGAAGGC
GAAGCGATGG GCGCACTGGC CCGCCGCCTC AACACTGAAA TCCCGGGCTT CCGCTCGCTG
GTCGCCAAGA CGGCGCGCGC CATGCCGCTG GCGGATGACC AAGGCAAGCC ACTGGCGCTG
ACGCCCGGCC AGACCCGCGC CAAGCTGCTC GAAGTCGACG AGCGCTGGGG CGATGTCACG
TACTGGCAGG CCATCGCCAA GAACAGCAGC CGCACGTCGC CGTTCTACCT GCTGGCCGCG
CTCGACCACC GCCAAGACGC CTTCGGCCAT ATCGAAGCGA CCGACGCCGA CGAGCAAATT
TACGTAACGG TGTTCGTGCG CACCTTTGTC ATCAGCGCGA TGGTGACGCT GTTCGCACTG
CTGCTCGGCT ATCCGCTGTC GTACTGGATT GCCTCGCTGC CAGAGCGCCG CGCCAACCTC
GTCATGGTGA TGGTGCTGAT CCCGTTCTGG ACGTCCATCC TGGTGCGGGT GGCGGCGTGG
ATCGTGCTGC TGCAGACCGA AGGCCTGATC AACCACGGGC TGATCGACCT CGGCATCATC
AAGGAGCCGC TGGCGCTGCT GTTCAACCGC GTGGGCGTGT ACATCTCGAT GACGCACATC
CTGCTGCCGT TCATGATCCT GCCGCTGTAC AGCGTGATGA AGTCGATCCC GCCCACGTAC
CAGCGCGCAG CCGTGTCGCT GGGCAGCCAT CCCTTTGCCG CTTTCTGGCG CGTGTATGTA
CCGCAGACGT ATCCGGGCAT CGGCGCCGGT GCGCTGCTGG TATTCATCCT GGCACTGGGC
TACTACATCA CGCCCGCGCT GCTCGGCGGG CCGAACGATC AGATGGTCAG CTACTACGTG
GCCTACTTCA CCAACGTCAC GATCAACTGG GGCATGGCGT GCGCGCTGGG TGCGCTGCTG
TTGCTGGCCA CGCTGGTGCT GTACGCCGTG TATGGACGCT TCACGCGCCC AAAGGTCCGC
GTCGGCTAA
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| Protein sequence | MTIAAESVPE STAKLKRELK SAEARRRAMA LALVAPLAIF LLLIFVVPIG ALLTRAVQNP
EVADALPKTV VALKGWDRKS PPADAAYAAL AEDLTTVSEG EAMGALARRL NTEIPGFRSL
VAKTARAMPL ADDQGKPLAL TPGQTRAKLL EVDERWGDVT YWQAIAKNSS RTSPFYLLAA
LDHRQDAFGH IEATDADEQI YVTVFVRTFV ISAMVTLFAL LLGYPLSYWI ASLPERRANL
VMVMVLIPFW TSILVRVAAW IVLLQTEGLI NHGLIDLGII KEPLALLFNR VGVYISMTHI
LLPFMILPLY SVMKSIPPTY QRAAVSLGSH PFAAFWRVYV PQTYPGIGAG ALLVFILALG
YYITPALLGG PNDQMVSYYV AYFTNVTINW GMACALGALL LLATLVLYAV YGRFTRPKVR
VG
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