| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1518 |
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| Symbol | |
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| ID | 8019163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1603170 |
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| End bp | 1604258 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830295 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_002981476 |
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| Protein GI | 241663116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0467578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG ACGACGTGAT CGTCAGCTTT CGCGGTGTAC GCAAGACGTA TGACGGCGAA
ACCCTCGTGG TCAAGCATCT GGACCTGGAC ATCTACCAGG GCGAGTTCCT CACCCTGCTC
GGCCCCTCGG GCTCGGGCAA GACCACGTGC CTGATGATGC TGGCCGGGTT TGAATTCCCG
ACCGGCGGCG AGATCCGGCT CGAAGGCGCG CTGCTCAACA ACGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTTCCGC ACATGACGGT GGCGCAGAAC
GTCGAGTACC CGCTGACCGT ACGCAAGCTG CCCGCCGCCG AACGTGCCGA GCGCGTGCAC
AAGGCCCTGC AGATGGTTCG CATGGAAGGC TTTGCCAAGC GCTACCCCGC CCAGCTCTCC
GGGGGCCAGC AGCAGCGCAT TGCACTGGCA CGCGCGCTGG TGTTCGAGCC CAAGCTCGTG
CTGATGGACG AGCCGCTCGG CGCGCTCGAC AAGCAACTGC GTGAACACAT GCAGTACGAG
TTGAAATCGC TGCACGAAAA GCTCGGCGTG ACCTTCGTCT ACGTGACGCA TGACCAGGGC
GAGGCGCTCA CCATGTCCGA CCGCGTGGCC GTGTTCGACA AGGGCATCGT GCAGCAGCTC
GACACGGTGG ACAGCCTCTA CGAACGCCCC TGCAACGAGT TCGTCGCCAA CTTCATCGGC
GACAGCAACA CGCTGCGCGG CACCGTCATC CGGGTCGACG GCGATTACTG CGAACTGCAG
CTCAACGACG GCGCCCGCGT GGTTGGCCGC AACGTCGCAG GTGCCAATAT CGGTGCCACC
GCTACCGGCT GTATCCGCCC GGAGCGCATG CGCCTGGCCG AAGGCGCCTC CGCCGCCGGC
AATGCGCTGG TGGGCCAGAC GCGCGGCCTC GTCTACTTTG GCGACCACGT GCGCATGCGC
TGCGCCCTGC CCGACCAACC CGAATGTTTT GTGAAGGTGC CGCTGGGCAC GCGCGCGCTC
GAAGGCTTCG CACCCGGCGC ACCGATCCAG CTTGAGTTCG CGCCTGAACA TCTGCGCGTT
TTTGCATGA
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| Protein sequence | MKTDDVIVSF RGVRKTYDGE TLVVKHLDLD IYQGEFLTLL GPSGSGKTTC LMMLAGFEFP
TGGEIRLEGA LLNNVPPHKR NIGMVFQNYA LFPHMTVAQN VEYPLTVRKL PAAERAERVH
KALQMVRMEG FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKSLHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGIVQQL DTVDSLYERP CNEFVANFIG
DSNTLRGTVI RVDGDYCELQ LNDGARVVGR NVAGANIGAT ATGCIRPERM RLAEGASAAG
NALVGQTRGL VYFGDHVRMR CALPDQPECF VKVPLGTRAL EGFAPGAPIQ LEFAPEHLRV
FA
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